Part of scaffold_2856 (Scaffold)

For more information consult the page for scaffold_2856 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MANSC1 ENSTTRG00000012992 (Bottlenosed dolphin)

Gene Details

MANSC domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012325, Bottlenosed dolphin)

Protein Percentage 91.97%
cDNA percentage 95.54%
Ka/Ks Ratio 0.76577 (Ka = 0.0422, Ks = 0.0552)

MANSC1 ENSBTAG00000008721 (Cow)

Gene Details

MANSC domain-containing protein 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011489, Cow)

Protein Percentage 75.67%
cDNA percentage 83.78%
Ka/Ks Ratio 0.50011 (Ka = 0.1472, Ks = 0.2944)

MANSC1  (Minke Whale)

Gene Details

MANSC domain containing 1

External Links

Gene match (Identifier: BACU016994, Minke Whale)

Protein Percentage 75.29%
cDNA percentage 80.42%
Ka/Ks Ratio 0.64968 (Ka = 0.2027, Ks = 0.312)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1581 bp    Location:96384..113218   Strand:+
>bmy_21298
GGCCTGCTCCAGGTTGCTGAGAAGCAGCTCCGGGTTGCAGGGCGGGAACGTGCCCTTCCACCTCCGGCAAACTTTCGGCCGCCGCAACGGAAGCAGGAACTCGTGAATCACAAACCCAGGGCTGGGCGAGAGCTGCGGAGTCTCCCGGGCGTCCTCGCCGAGCCCCTCGCGGATCCGCCGCTGCTTCCCCGAGCGCGCGGGGCTGCCCTGCACCGGGAGGGCAGCAGGGCCCGGTCCTCCCGTCTCCAGAGAAATTCCATCATCTGTACAATCTTCTTGAAGCAAACTCAGGCCAGAGGGAGAGTTATCCGACCTTTGGAGACCAAGACTAAACTGAAATTTAAAATGTTCTTCCGGGAGGGATGGAGCTTGACTTACACTCGTGTAATAATTTGTTTCCTGACACTAAGGCTGTCCACCAGTCAGAACTGCCCCACCAAGAGTCTAGAAGATATGGTCATTGACATCCAGTCATCCCTTTCCAAGGGAATCAGAGGCAATGAGCCCATACACACATTAACTCAAGAAGACTGCGTTAATTCTTGCTGCTCAACAAAAAACATATCAGGGGACAAAGCATGTAACTTGATGATCTTCGACACTCGAAAAACAACTAAACTACCCAACTGCTACCTGTTTTTCTGTCCCAGTGAGGAAGCCTGTCCCCTGAAACCAGCAAAGGGACTTATGAGTTACAGGATCATTAGAGATTTTCCATCTTTGGCRGGAACTGATTTGCCAAGCCAGGAGGTAGCCCAAGAAGAGTCTCTGTTCCGCAGCAGGTCTTCACACGCCATCACTCCCACACCCCCTCCTCCCACAGGTGCTTCAGAGCCCACGGTCTTATGGAGAGATTCATTCTCTCCGAAGTTTGGATCCTCAGATCACTTGGAGAAACTACTCAAGATTGATCTGGCGAGTCCACAGTGGACTGTTTATAAAGAAAAAGGCCACTCTCAGAAGTCACCATCTCCCTCAGAACAGACGGTGGCTCATCTGCTGCCTGAAGACGTGACAGTGTTCCCCAGTACAGTGGCAGCTGCTTCTCTGCCCACCGTCCTGGCCACTCCAAAGCCTGCATCTCTCCCTGCCGCCAGCGCTGCAGGGATACCTTCTGTGACTTCTCAGCCTCAGGGGGCCACCTCTGCCCCACCTGTAGCCACGGTCACTAACACGACCACAACTGAGGTTCCGACTTCCGTCTTTAGGGCATCGACAGACTCGAAAGGCCCACCAGACACGGTGCCCTTTAGAGACATTTCCAGCTTGACTTTGAACACAGAGGCTGCCCGGGACCCTGCTATGTTTCCTTTGTCAAATGTGAATTCTCCCACTACAAATACAGCAGCTTCCCAGGAAGATGGGAAGGCCAGCTCTGGTGGGCCCTCCCTGAGCAGTGCTCCGGAAAGTCAGCAGGACCTCGCATTTGAACAGTGGCTCCTGGTCGGGACCGTGCTCTTTGGGGTTCTGTTCCTCGCCATAGGCCTGGGACTCTTGGGCAGAACGCTCTTAGAATCCCTCCGCAGGAAACGTTACTCAAGGCTTGATTATTTGATCAATGGCATCTATGCTGACATCTAA

Related Sequences

bmy_21298T0 Protein

Length: 527 aa      View alignments
>bmy_21298T0
GLLQVAEKQLRVAGRERALPPPANFRPPQRKQELVNHKPRAGRELRSLPGVLAEPLADPPLLPRARGAALHREGSRARSSRLQRNSIICTIFLKQTQARGRVIRPLETKTKLKFKMFFREGWSLTYTRVIICFLTLRLSTSQNCPTKSLEDMVIDIQSSLSKGIRGNEPIHTLTQEDCVNSCCSTKNISGDKACNLMIFDTRKTTKLPNCYLFFCPSEEACPLKPAKGLMSYRIIRDFPSLAGTDLPSQEVAQEESLFRSRSSHAITPTPPPPTGASEPTVLWRDSFSPKFGSSDHLEKLLKIDLASPQWTVYKEKGHSQKSPSPSEQTVAHLLPEDVTVFPSTVAAASLPTVLATPKPASLPAASAAGIPSVTSQPQGATSAPPVATVTNTTTTEVPTSVFRASTDSKGPPDTVPFRDISSLTLNTEAARDPAMFPLSNVNSPTTNTAASQEDGKASSGGPSLSSAPESQQDLAFEQWLLVGTVLFGVLFLAIGLGLLGRTLLESLRRKRYSRLDYLINGIYADI*