Sequence detailsbmy_21314 (Coding sequence)

Part of scaffold_2873 (SequenceType object (1))

For more information consult the page for scaffold_2873 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRRC1ENSTTRG00000015110 (Bottlenosed dolphin)

Gene Details

proline-rich coiled-coil 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014323, Bottlenosed dolphin)

Protein Percentage 53.09%
cDNA percentage 56.52%
Ka/Ks Ratio 1.11377 (Ka = 0.1688, Ks = 0.1515)

PRRC1ENSBTAG00000021977 (Cow)

Gene Details

protein PRRC1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000029302, Cow)

Protein Percentage 82.25%
cDNA percentage 82.47%
Ka/Ks Ratio 0.36343 (Ka = 0.1417, Ks = 0.3898)

Additional orthologs identified in other species via the OPTIC pipeline.

PRRC1 (Human)   Prrc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1650 bp    Location:25500..91138   Strand:+
Raw sequence 
>bmy_21314
ATGATGGAAGAGAGTGGAATAGAGACAACACCACCTGGGACTCCTCCACCAAGTTCAGCGGGACTGGCTGTAGCTGCCGCAGCGGCACAGCCGTCTTCCCCCCCAGCCCCTTTAGCTGCAGCCAGCGCTTTCTCTTCTCCAAGCGTGTCCTCTGTGCAGCCCCTGCCGCCACACACGTACTCCACCCCTCAGCAGTCCCTGCCTCCTGTGAGGCCTTCGCCACCCTTGCCCTTTGTGCCTCCTTCGCCAGTTCCTTCTGGTCCTCCACTCATTACCTCTTCACCACCTCATGTTTCTCCACCAACTGCTGCTGCCTTCAGTAACCCTCCTTTATCCCACTTCCCACCTTCCACTTCTGCCCCAAACACTCTCTTATCTGCCCCCGCTTCGGGTCCTCCCACATCAGGATTCTCTGTCGGCGCAGCCTATGACATTACACGAGGACATGCAGGAAGAGCTCCCCAGACACCCCTGATGCCGTCTTTTTCTGCACCTCCGGTGACAGGTATTTTGCCAACTCCCATTACTCAGCAAGCTGGTTTGACATCTCTGGCACAGGGAACTGGAACCACATCAGCCATCACTTTTCCAGAGGAGCAAGAAGATCCTAGAATTGGCAGAGGGCAGGATGAAGCATCTGCTGGTGGACTCTGGGGTTTTATTAAGGGTGTGGCTGGGAACCCTATGGTGAAATCTGTGCTTGATAAAACAAAACATTCAGTAGAAAGCATGATTACAACGCTGGACCCTGGCATGGCTCCATATATCAAATCTGGAGGTGAACTGGACATTGTAGTGACCTCAAATAAAGAAGTAAAAGTTGCCGCTGTCCGAGATGCCTTCCAGGAGGTCTTTGGCTTAGCTGTGGTGATAGGGGAAGCTGGGCAGTCCAGCATTGCCCCACAACCAGTGGGCTATGCAGCTGGATTAAAAGGTGCCCAGGAACGGATAGATAGCTTGCGTCGAACTGGAGTGATCCATGAAAAACAGACTGCTGTGTCAGTAGAAAACTTCATTGCAGAATTGCTTCCTGACAAATGGTTTGACATTGGCTGTCTGATAGTTGAAGACCCTGTGCATGGTATTCATCTAGAAGCATTTACACAAGCCACACCAGTACCCTTGGAATTTGTACAACAGCCTTTTCTCTTTGCTTTTCAATTTTCTATTCCTTCCATGTTGTTTCACTACCTCCCTACTTTCGTTTTCCAGCGGTCTTTGTCAAGAATCATTAACATTGACATCCCATTAGAGGACAATTTTCTTCGAATCCCCAAACAGCAATGGCAGAGTTATTCTGTGGTTTGGGTGCAGATGATTTTCCTGCACCTGTGCTCCCAGAACTACTTACTGAATTTGATAAATACTATGCAGGATGATATATTGGATAAAGCCAATTTTGTACAAGTAACTGGAAGAGGGAAAAAAATGGCAACAGAAACAAAATTGGCAAAGTTTGAGAGGGCTGCTTTGGCTTTGCTGCTGTGTCAAGAAACAGCTAGTGGCAGTGTAAAAGATGCATTAATTAGCGAGGGAGAGAGAAGCCAACTTGGAAGATATAAAAACAGTCTCAGTTGGAAACGAGCAAGGCCTGGTTTACGGCAGCAGTGCCCAGGACAGATGAAAGCAAGATGTCCCATAGCCAGGTGA

Related Sequences

bmy_21314T0 SequenceType object (3)

Length: 550 aa      View alignments
>bmy_21314T0
MMEESGIETTPPGTPPPSSAGLAVAAAAAQPSSPPAPLAAASAFSSPSVSSVQPLPPHTYSTPQQSLPPVRPSPPLPFVPPSPVPSGPPLITSSPPHVSPPTAAAFSNPPLSHFPPSTSAPNTLLSAPASGPPTSGFSVGAAYDITRGHAGRAPQTPLMPSFSAPPVTGILPTPITQQAGLTSLAQGTGTTSAITFPEEQEDPRIGRGQDEASAGGLWGFIKGVAGNPMVKSVLDKTKHSVESMITTLDPGMAPYIKSGGELDIVVTSNKEVKVAAVRDAFQEVFGLAVVIGEAGQSSIAPQPVGYAAGLKGAQERIDSLRRTGVIHEKQTAVSVENFIAELLPDKWFDIGCLIVEDPVHGIHLEAFTQATPVPLEFVQQPFLFAFQFSIPSMLFHYLPTFVFQRSLSRIINIDIPLEDNFLRIPKQQWQSYSVVWVQMIFLHLCSQNYLLNLINTMQDDILDKANFVQVTGRGKKMATETKLAKFERAALALLLCQETASGSVKDALISEGERSQLGRYKNSLSWKRARPGLRQQCPGQMKARCPIAR*