Part of scaffold_2920 (Scaffold)

For more information consult the page for scaffold_2920 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PROM2 ENSTTRG00000004969 (Bottlenosed dolphin)

Gene Details

prominin 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004682, Bottlenosed dolphin)

Protein Percentage 77.01%
cDNA percentage 80.15%
Ka/Ks Ratio 0.52838 (Ka = 0.0475, Ks = 0.0898)

PROM2 ENSBTAG00000001952 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002536, Cow)

Protein Percentage 84.75%
cDNA percentage 89.36%
Ka/Ks Ratio 0.23217 (Ka = 0.0765, Ks = 0.3293)

PROM2  (Minke Whale)

Gene Details

prominin 2

External Links

Gene match (Identifier: BACU017730, Minke Whale)

Protein Percentage 93.08%
cDNA percentage 94.82%
Ka/Ks Ratio 0.36699 (Ka = 0.0399, Ks = 0.1087)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2502 bp    Location:34764..20795   Strand:-
>bmy_21344
ATGGTGCGTGCGCCCGGCCTCCTGGCGGCCCTGCTGGGCCTGGGGCTGGCCCTGGCCCTGGCCCTGCGGCGGGCGGGCGCGGCGGACTGCGGGGCCCTCGGCCCGGCGGAGCGCCTGGCGTTCGCCCCGGCGGCCAAGACCCGCTGGCTGGCCCCTCGCGTCCGCGCGCCGGGGCCCCTCGACCCCCTCTACGGCACCGTGCGCCGCTTCCTCTCCGTGGTGCAGCTCAACCCCCTCCCCGCCGAGCTGATAAAGGCCTTGCTGAATGAGCCATCCTCCGTGAAGGCAGATGAGGTGGTGCGGTATGAGGCAGGCTACATGGTGTGTGCCGTGATCACCGGCCTCTACCTCCTGGTGGTACCCACCGCTGGGCTCTGCTTCTGTTGCTGCCGCTGCCGCCGGCGCTGTGGGGGCCGAGTGAAGATGGAGCACAAGACAATGGCCTGCGAGCGAGGCACCCTCGTGGCCTTCCTGCTGCTGACCACCCTCGTGCTGCTGATCGGCGTGGTCACTGCCTTTGTCACCAACCAGCGCACGCATGAGCAGATGGGCCCCAGTGCCAAGGCCCTGCCGGAGACTCTGCTCAGCCTCCGGGGCCTGGTCTCCGATGTCCCCCAGGAGCTGCAGGCCGTGGCACAGCAGTTTTCCCTTCCTCAGGAGCAAGTCTTGGAGGAACTGGATGGTGTCAGCAGGAGCATTGGGAACGTGATCCACACCCAGCTCAAGAGCACCGTGTATGAAGTCCTGGCCTCCGTGCTCAGCCTGGGCCAGGCGCTGCAGGTCTCCGTGGACCACCTCCGAGCCCTGAACGCCACCTCTGTGGAACTTCAGGAGGGGCAGCAGGCCCTGGCGCCGGCTGTCCAGGGGCACCGGGAGCGCCTCCTGGCCCTGCTGCAGGAGCCCGGCTGCCGGGGCTGTGCAGAGGCCCTGGACAGAGCCCACGCCTTGGAGCTGGGAGCCGACTTCAGCCAGGTGCCCTCTGTGGATGATGCCCTGCATCGGCTGAAAGGTGTCCCAGAGGCCAACTTCTCCAGCATGGTCCAAGAGGAGAACAGTACCTTCAACGCCCTCCCGGCTCTGGCTACCTTGCAGATGGCCGACGTGATCAGAGAGCTGAAGAAGGTGGTGGCCCAGCAGCCTAGAGAGCTGAGGACACTGGTCGAAGCATTCCCAGGCTGGGAGGCGGCTGCTCACTGGAGCCAAGCACTGGAGGAGATGGAACAGAGCAGCCGCCCCTACTTGAAGGAGGTGCAGAGATATGAGAAATACAGGTGGATTGTGGGCTGCGTGCTGTGCTCTGTGGTCCTGCTTGTGGTGGTCTGTAACCTGCTGGGCCTCAACCTGGGCATCTGGGGGCTCTGTAACAGGGAAGACCCCAGCCACTCGGAAGCCAAGGGCGAGGCTGGAGCCCGCTTCCTCATGGTGGGTGTGGGCTTCAGCTTCCTCTTCGCTGCGCCCCTCATCCTCCTTGTCTTCGCCACCTTCCTGGTGGGTGGCAACGTGCAGACCCTGGTGTGCCGGAGCTGGGAGAGCGGGGAGCTATATGAGTTTGCAGACACTCCGGGGAACTTGCCGTCATCCATGAACTTGTCCCAACTTCTGGGCCTGAAGAAGAACCTCAGCGTCCTCCTGGCCTATCAGCAGTGCAAGCAAGGGGCTGCGCTCTGGACGGTCCTGCAGCTCAATGACTCCTATGACCTGGAGAAGCACCTGGATATCAGCCAGTACACTGGCAAGCTGCAGCAGGAGTTGCAGAAACTCAAAGTGGACGTGAAGAATCTGGACCTGCTGAGCCCAGCCGCCCGCCAGGACCTGGAGGCCCTGCAGAGCAGTGGGCTCGAGAGCATCCACTACCCAGGCTTCCTTGTTGAGATTCAGAAGCCTGTGGTGAACGTCAGCGTGGAGAAGCTGGCCCAGGAGCTGGAGAGACTGTCCCAGACCCAAGGCAATACTGTGCTGGGGCAGCAGCTGCAGGAGGAGGCCCAGGGGCTCAGAAACCTCCATCAGGAGAAGCTCCTCCTCCAGCAGAGCCTTGTGGCTAAGCTCAACCTCAGTGTCCATGCCCTGGCATCCTCTGCCCCACTTCTCCAGCCGGAGACCTCAGATGTCCTGGACAGAGTCACTCACCTGAAAGGAGAGCTGCCTACCTGGGCCACCCGTATCCTGAAGAATGAAAGTGAGTGTTTCCTGACCCGGGAGATGGGCTACTTCTCCCAGTACGTGGCCTGGGTGAGAGAGGAGGTGACTCAGCGCATCGCCACCTGCCAGCCCCTCTCCGGAGCCCTGGACAATGGCCGTGTGATCCTGTGTGACATGGTGGCTGACCCCTGGAACGTCTTCTGGTTCTGTCTGGGGTGGTGCACCTTCTTCCTGATCCCCAGCATCATCTTTGCTGTCAAGACCTCCAAATACTTCCRTCCCATCCGGAAGCGCCTCAGCTCCRCCAGCTCTGAGGAGACTCAGCTCTTCCACATCCCCCGGGTCACCTCCCTGAAGCTGTAG

Related Sequences

bmy_21344T0 Protein

Length: 834 aa      View alignments
>bmy_21344T0
MVRAPGLLAALLGLGLALALALRRAGAADCGALGPAERLAFAPAAKTRWLAPRVRAPGPLDPLYGTVRRFLSVVQLNPLPAELIKALLNEPSSVKADEVVRYEAGYMVCAVITGLYLLVVPTAGLCFCCCRCRRRCGGRVKMEHKTMACERGTLVAFLLLTTLVLLIGVVTAFVTNQRTHEQMGPSAKALPETLLSLRGLVSDVPQELQAVAQQFSLPQEQVLEELDGVSRSIGNVIHTQLKSTVYEVLASVLSLGQALQVSVDHLRALNATSVELQEGQQALAPAVQGHRERLLALLQEPGCRGCAEALDRAHALELGADFSQVPSVDDALHRLKGVPEANFSSMVQEENSTFNALPALATLQMADVIRELKKVVAQQPRELRTLVEAFPGWEAAAHWSQALEEMEQSSRPYLKEVQRYEKYRWIVGCVLCSVVLLVVVCNLLGLNLGIWGLCNREDPSHSEAKGEAGARFLMVGVGFSFLFAAPLILLVFATFLVGGNVQTLVCRSWESGELYEFADTPGNLPSSMNLSQLLGLKKNLSVLLAYQQCKQGAALWTVLQLNDSYDLEKHLDISQYTGKLQQELQKLKVDVKNLDLLSPAARQDLEALQSSGLESIHYPGFLVEIQKPVVNVSVEKLAQELERLSQTQGNTVLGQQLQEEAQGLRNLHQEKLLLQQSLVAKLNLSVHALASSAPLLQPETSDVLDRVTHLKGELPTWATRILKNESECFLTREMGYFSQYVAWVREEVTQRIATCQPLSGALDNGRVILCDMVADPWNVFWFCLGWCTFFLIPSIIFAVKTSKYFXPIRKRLSSXSSEETQLFHIPRVTSLKL*