Part of scaffold_2994 (Scaffold)

For more information consult the page for scaffold_2994 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TCN1 ENSTTRG00000009445 (Bottlenosed dolphin)

Gene Details

transcobalamin I (vitamin B12 binding protein, R binder family)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008952, Bottlenosed dolphin)

Protein Percentage 81.46%
cDNA percentage 89.82%
Ka/Ks Ratio 1.08779 (Ka = 0.1143, Ks = 0.1051)

TCN1 ENSBTAG00000020580 (Cow)

Gene Details

transcobalamin-1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027423, Cow)

Protein Percentage 67.98%
cDNA percentage 77.95%
Ka/Ks Ratio 0.56561 (Ka = 0.2306, Ks = 0.4078)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1401 bp    Location:153878..186504   Strand:+
>bmy_21448
ATGAGCAGGTTCTTCACCTTTGGCTTTGACCTTGACTCCACCCATCTTGCACCAGCTAAGCACAGCAGCCACTGCAAGGAATATGGATTGTTTTTGCTGATCCAAATTCCTTACTATCTGGAAAATATGGAAAGCACAAAGAACGAAATTAAACTCTTTATAAAAGCCACCATTTTTTATATTCAGAGAGAGACTTCTTTCTACCACCTGAAACTTGACATTCTCCTGATCACTCCATTACCGAAATCAGGGATGCAAAGAAAGTGCCACCAGCAAATCTTTGAGAACTGTGACTTCTCCAGGCCCTCTGAAGTTCCTGGGAGAAGACAGGTAAGCAAAGAAAACTGCTCCTATCTAAATCCTCTAGTAAACACAATGGTAAATTCAAACTATACCAAAGGAATCCAAAATGCCAACATCCTGTTGACCCTCAGACTTGTTGGGATTCAGAACCAAAGGCTAGAACAACAGCTGACTCAACAAATTCAAGAAGATATGAACAGGAGAGAGTCAGAGATAACCTCAGGAGAGCTTGCCTTGGTTATCCTGGCTTTGGGAGCGTGTAAAAACCTTGATGAAGAGTTTATACGTGATGCTCATCTGGTTAGCAAACTAGGAGAGAAATTCAAAGCAGAAATTGAGAATATGGAAACACACAGTGACAATCCGCTGACTAACTATTACCAGCTCAGCCTGGCCCTCTTGACCTTGTGTCTGTCCAATGGGAGCTACTCAATCACCAACGTTATTCCTTACTTCGCTCCTGAAAATAAAAACTATTATTTTGGTGGCCAGTTCTCAATTCTGTCTGCAAAACATGATGGTCTCTTTGGAAACATATTTAGCACAGGAGAATCTATGCAGGCTCTGTTTGTCTCCTCAAACTATTACAAAAATGAAGGGAATTGCCAAGAAACTCTGCACACAGTACTTTACAACATTTCTCAGGGAGCATTCCATCTGCCAATTGCTGCAGCCCAGATCTTACCTGCCCTGATGGGAAAGACCTACTTGGATGTCAACAAAGACTGTTCTTGTGTCTGCAGTCCAGTTAAATTCAACATCTCCACTGACGAGCCTGTAACTGTGACACCTATCATCTCACCCTCGTATATTTCAGTCAATTACTCTGTGCAAATCAATGAAATTTTCAATTCCACCAAAGTCACCGTGAGAAAGGGTTCTGTCTTCCTCGATGTGATGAAGGCAGCTCAGAAACAAAATGAGGCTGCATTTCGTCCATGGGGGCCCTACATCATCTCTGTTCAGGACATAACGGCCAACAATAGTGACAGAACCTACTGGGAACTTCTGAGCAATGGCCAACCGCTGAGCCAAGGAGCTGGGAGTTATGTTGTCAAAAATGGAGAATATTTGCAGGTTCGTTGGAGCAAATACTAA

Related Sequences

bmy_21448T0 Protein

Length: 467 aa      View alignments
>bmy_21448T0
MSRFFTFGFDLDSTHLAPAKHSSHCKEYGLFLLIQIPYYLENMESTKNEIKLFIKATIFYIQRETSFYHLKLDILLITPLPKSGMQRKCHQQIFENCDFSRPSEVPGRRQVSKENCSYLNPLVNTMVNSNYTKGIQNANILLTLRLVGIQNQRLEQQLTQQIQEDMNRRESEITSGELALVILALGACKNLDEEFIRDAHLVSKLGEKFKAEIENMETHSDNPLTNYYQLSLALLTLCLSNGSYSITNVIPYFAPENKNYYFGGQFSILSAKHDGLFGNIFSTGESMQALFVSSNYYKNEGNCQETLHTVLYNISQGAFHLPIAAAQILPALMGKTYLDVNKDCSCVCSPVKFNISTDEPVTVTPIISPSYISVNYSVQINEIFNSTKVTVRKGSVFLDVMKAAQKQNEAAFRPWGPYIISVQDITANNSDRTYWELLSNGQPLSQGAGSYVVKNGEYLQVRWSKY*