Part of scaffold_2995 (Scaffold)

For more information consult the page for scaffold_2995 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

U2AF2 ENSTTRG00000000987 (Bottlenosed dolphin)

Gene Details

U2 small nuclear RNA auxiliary factor 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000930, Bottlenosed dolphin)

Protein Percentage 84.34%
cDNA percentage 86.59%
Ka/Ks Ratio 0.37652 (Ka = 0.1196, Ks = 0.3176)

U2AF2 ENSBTAG00000002830 (Cow)

Gene Details

splicing factor U2AF 65 kDa subunit

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003664, Cow)

Protein Percentage 84.34%
cDNA percentage 83.37%
Ka/Ks Ratio 0.14234 (Ka = 0.1116, Ks = 0.7838)

U2AF2  (Minke Whale)

Gene Details

U2 small nuclear RNA auxiliary factor 2

External Links

Gene match (Identifier: BACU006011, Minke Whale)

Protein Percentage 76.05%
cDNA percentage 80.18%
Ka/Ks Ratio 0.32908 (Ka = 0.1839, Ks = 0.5588)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1263 bp    Location:28809..44622   Strand:+
>bmy_21467
ATGTCGGACTTCGACGAGTTCGAGCGGCAGCTCAACGAGAATAAGCAAGAGCGTGACAAGGAGAACCGGCACCGGAAGCGCAGCCACAGCCGCTCTCGAAGCCGGGACCGCAAGCGCCGCAGCCGCAGCCGGGACCGGCGCAACCGGGACCAGCGCAGCGCCTCCCGGGACAGGCGGCGCCGAAGCCCCTTGACAACAGCCCCTACTGTTGAAGTTGACAGCGGGGATGAAGCTGTCAACAGACCTGGTTTCGCGGAGGCGGTGGTTGCCCGTGGCCGGGAGGGCGCTGCTGTTGCGCCGGTGCACGGGCGCCCTGCCGTCCTCTCATCCTCGTCTCTTCCTTTTGAAGCTGCCGGTCAGATTCCAGCCACCGCCCTTCTCCCCACCATGACCCCTGACGGTCTGGCTGTGACCCCGACGCCGGTGCCCGTGGTCGGTAGCCAGATGACCAGACAGGCCCGGCGCCTCTATGTGGGCAACATCCCCTTCGGCATCACTGAGGGCCCCGATGTGCCGCCGTGCTGGGGTCGCTCTGCGTCCCGAAGAGTGCTGCCGGGGCGCGCCTCCAAGGAGGGGCTGGGGCGGGCGCGAGTCGTGTCCACTGTGGTCCCGGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAATGACGACCAGGTAAAAGAGCTGTTGACATCGTTTGGGCCTCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACAGGGCTCTCCAAGGGCTACGCCTTCTGTGAGTACGTGGACATCAACGTCACAGATCAGGCCATCGCGGGGCTGAACGGGATGCAGCTGGGGGATAAGAAGCTGCTTGTCCAGAGGGCAAGCGTGGGAGCCAAGAATGCCACGCTGAGTACCATCAACCAGACCCCCGTGACCTTGCAAGTGCCTGGCCTGATGAGCTCCCAGGTGCAGATGGGTGGTCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTCCTGCCCGAGGAGCTGCTGGACGACGAGGAGTACGAGGAGATCGTGGAGGACGTGCGTGACGAATGCAGCAAGTACGGGCTCGTCAAGTCCATCGAGATCCCCCGGCCCGTGGACGGCGTGGAGGTGCCCGGCTGTGGAAAGATCTTCGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGTCGCAAGTTCGCCAACAGAGTGGTTGTCACAAAATACTGTGACCCCGACTCTTACCACCGCCGGGACTTCTGGTAG

Related Sequences

bmy_21467T0 Protein

Length: 421 aa      View alignments
>bmy_21467T0
MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSPLTTAPTVEVDSGDEAVNRPGFAEAVVARGREGAAVAPVHGRPAVLSSSSLPFEAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEGPDVPPCWGRSASRRVLPGRASKEGLGRARVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDFW*