Part of scaffold_3040 (Scaffold)

For more information consult the page for scaffold_3040 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLP1 ENSTTRG00000003946 (Bottlenosed dolphin)

Gene Details

proteolipid protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003712, Bottlenosed dolphin)

Protein Percentage 96.06%
cDNA percentage 96.19%
Ka/Ks Ratio 0.55357 (Ka = 0.0331, Ks = 0.0598)

PLP1 ENSBTAG00000006977 (Cow)

Gene Details

Myelin proteolipid protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009171, Cow)

Protein Percentage 97.93%
cDNA percentage 96.97%
Ka/Ks Ratio 0.11337 (Ka = 0.01, Ks = 0.0884)

PLP1  (Minke Whale)

Gene Details

proteolipid protein 1

External Links

Gene match (Identifier: BACU011199, Minke Whale)

Protein Percentage 96.08%
cDNA percentage 96.47%
Ka/Ks Ratio 0.43542 (Ka = 0.028, Ks = 0.0644)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1041 bp    Location:156023..96387   Strand:-
>bmy_21536
ATGTTTAGATGTCTGTCTCATGTCCAAGTCTATATTCAGACTCTGGCCTCTCCACTGCTCTGCATCTACTCAGACCTCTACTTACCTGGGGTTGGCTGTCAATCAGAAAGCCCTTTTCATTGCAGGAGAAGAGGACAAAGATACTCAGAGAGAAAAAGTAAAGGACCGAAGAAGGAGACTGGAGAGACCAAGATCCTTCCAGCTGAACAAAGTCAGCTGCAAAGCAGACTAGCCAGCCGGCTACAATTGGAATCAGAGTCCCAAAGACATGGGTGGCTGTTTGCCGAGCAGCGTAGTTTTGGCTGGCTCAGAGTAAGCTTGTTAGAGTGCTGTGCGAGATGTCTCGTAGGGGCCCCCTTTGCTTCCCTGGTGGCCACTGGATTGTGTTTCTTTGGGGTGGCACTGTTCTGTGGCTGTGGACATGAAGCACTCACTGGCACAGAAAAGCTAATTGAGACCTATTTCTCCAAAAACTACCAGGACTATGAGTATCTCATCAATGTGATCCATGCTTTCCAGTATGTCATCTATGGAACTGCCTCTTTCTTCTTCCTTTATGGGGCCCTCCTGCTGGCTGAGGGCTTCTACACCACCGGCGCAGTCAGGCAGATCTTTGGCGACTACAAGACCACCATCTGCGGCAAGGGCCTGAGTGCAACGTTTGTGGGCATCACCTATGCCCTGACCATTGTGTGGCTCCTGGTGTTTGCCTGCTCTGCTGTGCCTGTGTACATTTACTTCAACACTTGGACCACTTGCCAGTCTATTGCCTCCCCCAGCAAGACCTCTGCCAGTATAGGCAGTCTCTGTGCTGATGCCAGAATGTATGGTGTTCTCCCATGGAATGCTTTCCCTGGCAAGGTGTGTGGCTCCAACCTTCTGTCCATCTGCAAAACAGCTGAGTTCCAAATGACCTTCCACCTGTTTATTGCTGCGTTTGTGGGGGCCGCAGCCACACTGGTTTCCCTGCTCACCTTCATGATTGCTGCCACTTACAACTTTGCCGTCCTGAAACTCATGGGCCGAGGCACCAAGTTCTGA

Related Sequences

bmy_21536T0 Protein

Length: 347 aa      View alignments
>bmy_21536T0
MFRCLSHVQVYIQTLASPLLCIYSDLYLPGVGCQSESPFHCRRRGQRYSERKSKGPKKETGETKILPAEQSQLQSRLASRLQLESESQRHGWLFAEQRSFGWLRVSLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEYLINVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFVGITYALTIVWLLVFACSAVPVYIYFNTWTTCQSIASPSKTSASIGSLCADARMYGVLPWNAFPGKVCGSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLKLMGRGTKF*