Part of scaffold_3047 (Scaffold)

For more information consult the page for scaffold_3047 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DDX43 ENSTTRG00000001488 (Bottlenosed dolphin)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 43

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001404, Bottlenosed dolphin)

Protein Percentage 87.57%
cDNA percentage 90.77%
Ka/Ks Ratio 0.73787 (Ka = 0.0379, Ks = 0.0513)

DDX43 ENSBTAG00000021814 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029077, Cow)

Protein Percentage 88.05%
cDNA percentage 90.44%
Ka/Ks Ratio 0.27662 (Ka = 0.0672, Ks = 0.243)

DDX43  (Minke Whale)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 43

External Links

Gene match (Identifier: BACU001342, Minke Whale)

Protein Percentage 97.29%
cDNA percentage 98.07%
Ka/Ks Ratio 0.48018 (Ka = 0.0162, Ks = 0.0337)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1638 bp    Location:129823..117651   Strand:-
>bmy_21541
ATGATTTGGGAAGAACTAGAGAAGGCTTTGAGCAAAGTCGGGCGTGGTGGGTCAAAAATAAAAGAGATCCAGAGCTCAACATACACCAAAATACAGATAATAAAAGGGTACCCTGAAGCGGAAGTAAGAATTTTTGGCACCAAGGCAATGCAGAGCAAAGCGAAAACAGTGATAGATAATCTTGTTCAAAAACAAGAAGACTACAAAACAGAATCCAAAGTTGATGTTGCTGTTGTCCAACCTTCGGATGGAACAGATGCAAGGAAAGATGTTTCAGGAAATCAGAAATTGGTTGATTGGGATAAGTTCCGAGAAGATATTTTGAAATGGAACAAAAAAAAGTGGGCAGGTTTACCTCCAATTAAGAAAAACTTTTACGTGGAGTCAGAAACAACAAGTTCAATGTCACAAGACCAAGCAGACAATTGGAGGAGGGAAAATTATAATATAATGTGTGATGACTTGAAAGGTGGTGAGAAACGTCCTCTTCCCAACCCTGTTGGTAATTTTGAGGATGCATTTCACTGTTATCCTGAAGTTATGAGAAACCTTCAAAAGGCAGGTTTTCAAAGGCCAACACCAATTCAGTCACAGGCATGGCCAATCATTCTACAAGGAGTAGATCTTATAGGAGTAGCTCAGACTGGAACGGGGAAGACATTGTCCTACTTAATGCCTGGATTTATTCATATTGACTCACAACCTCTAGCCAGGAATGGGCCGGGCATGTTAGTCCTCACCCCGACTCGAGAGCTAGCTCTGCAAGTGGAAGCTGAGTGCCGTAAATATTCATATAAAGGTCTTAAAAGCGTTTGTATATATGGTGGTGGCGATAGAGATGGACAAATAAAAGACTTAGCGAAAGGTGTCGATATCATTATTGCCACTCCCGGAAGACTCCACGATCTACAAATGAATAACTTTGTGTACCTGAAGAGCATAACCTACCTGGTAATCGTGGAGCAGGGTGCAACGTGGCCATGTGCTGTCCGTAGACTCGCACAATCTTATTTGAAAGAGCCCATGATTGTGTATGTTGGTACTTTGGATCTAGCTGCTGTAAGTACCGTGAAGCAAAATATAATTGTCACCACAGAAGACGAGAAACGATCGCATATCCAAACTTTCATCGAGAGCATGTCTCCCAAAGACAAAGTCATAATATTTGTTAGCCGGAAAGCTGTGGCTGATCATTTATCAAGTGACCTGTGTATCCGGCATATATCAGTAGAGTCTCTGCATGGCAACAGAGAACAGAGTGATCGAGAGAGAGCATTAAAAAACTTTAAAACAGGGAAAGTGCGAATACTGATTGCTACCGATTTAGCATCTCGTGGTCTTGATGTCCATGATGTCACACACGTCTATAATTACGATTTTCCCCGGAACATCGAAGAATATGTGCACAGAGTAGGGCGCACCGGGAGAGCAGGGAGGACCGGGGTATCTGTTACCCTTATCACTAGAAATGATTGGAAGATTGCTGGTGAATTAATTAATATTCTGGAAAGAGCAAATCAGAGTGTCCCAGAGGATCTTGTGGTGATGGCTGAGAGATATAAAGCAAATAAACTGAAAAAAGAAATGGAAAATAAATGGGAAAGACCCCAAGGAAAACCCAAGAAGTTTTATTGTTAA

Related Sequences

bmy_21541T0 Protein

Length: 546 aa      View alignments
>bmy_21541T0
MIWEELEKALSKVGRGGSKIKEIQSSTYTKIQIIKGYPEAEVRIFGTKAMQSKAKTVIDNLVQKQEDYKTESKVDVAVVQPSDGTDARKDVSGNQKLVDWDKFREDILKWNKKKWAGLPPIKKNFYVESETTSSMSQDQADNWRRENYNIMCDDLKGGEKRPLPNPVGNFEDAFHCYPEVMRNLQKAGFQRPTPIQSQAWPIILQGVDLIGVAQTGTGKTLSYLMPGFIHIDSQPLARNGPGMLVLTPTRELALQVEAECRKYSYKGLKSVCIYGGGDRDGQIKDLAKGVDIIIATPGRLHDLQMNNFVYLKSITYLVIVEQGATWPCAVRRLAQSYLKEPMIVYVGTLDLAAVSTVKQNIIVTTEDEKRSHIQTFIESMSPKDKVIIFVSRKAVADHLSSDLCIRHISVESLHGNREQSDRERALKNFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSVTLITRNDWKIAGELINILERANQSVPEDLVVMAERYKANKLKKEMENKWERPQGKPKKFYC*