Part of scaffold_3108 (Scaffold)

For more information consult the page for scaffold_3108 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC17A5 ENSTTRG00000005694 (Bottlenosed dolphin)

Gene Details

solute carrier family 17 (anion/sugar transporter), member 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005377, Bottlenosed dolphin)

Protein Percentage 96.81%
cDNA percentage 97.16%
Ka/Ks Ratio 0.25195 (Ka = 0.015, Ks = 0.0593)

SLC17A5 ENSBTAG00000044053 (Cow)

Gene Details

sialin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053184, Cow)

Protein Percentage 92.93%
cDNA percentage 92.11%
Ka/Ks Ratio 0.15736 (Ka = 0.0359, Ks = 0.2285)

SLC17A5  (Minke Whale)

Gene Details

solute carrier family 17 (acidic sugar transporter), member 5

External Links

Gene match (Identifier: BACU001336, Minke Whale)

Protein Percentage 79.51%
cDNA percentage 83.86%
Ka/Ks Ratio 0.62969 (Ka = 0.1594, Ks = 0.2532)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 849 bp    Location:80939..62770   Strand:-
>bmy_21546
CCAGTGTGCTGCCCTGCTCGTTACAACCTAGCATTTTTGGCCTTTTTTGGTTTCTTCGTCCTCTATTCGTTACGGGTGAATCTGAGTGTGGCRTTAGTGGATATGGTGGATTCCAACACRACTGCAGCAGAGAATAGAACTGCCAACGAGTGTGCAGAGCATGCAGCTCCCATAAAAGTTCTTCATAACCAAACGGGTGTCACATTTCCAGCCATGCATGCCATGTGGTCTTCGTGGGCTCCTCCTCTTGAAAGAAGCAAGCTTCTCAGCATTTCATATGCAGGAGCACAGCTTGGGACAGTAGTTTCTCTTCCTCTTTCTGGAATAATTTGCTTCTATATGAATTGGACTTAYGTCTTCTACCTCTTTGGTATAGTTGGAATCATTTGGTTTATTTTATGGATCTGGTTAGTTAGTGATACACCAGAAACTCACAAGACAATCTCCCCCTATGAAAAGGAATACATTCTTTCATCATTAAGAAATCAGCTCTCTTCACAGAAGTCAGTGCCATGGATACCTATGCTGAAATCACTAGCACTTTGGGCTATTGTAGTTGCACATTTTTCTTACAACTGGACTTTTTATACTTTATTGACCTTATTGCCTACTTATATGAAGGAGGTCCTAAGGTTCAATATTCAAGAGAATGGGTTTTTATCTGCAGTCCCTTATTTAGGCTGTTGGTTATGTATGATCCTGTCTGGTCAGGCCGCCGACAATTTAAGGGCAAAATGGAATTTTTCAACTCTATGTGTTCGAAGAGTTTTTACCCTTATAGGAATGATTGGACCTGCAGTATTCCTGGTAGCAGCCGGATTTATAGGTTGTGATTATTCTTTGGCTGTT

Related Sequences

bmy_21546T0 Protein

Length: 283 aa      View alignments
>bmy_21546T0
PVCCPARYNLAFLAFFGFFVLYSLRVNLSVALVDMVDSNTTAAENRTANECAEHAAPIKVLHNQTGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGTVVSLPLSGIICFYMNWTYVFYLFGIVGIIWFILWIWLVSDTPETHKTISPYEKEYILSSLRNQLSSQKSVPWIPMLKSLALWAIVVAHFSYNWTFYTLLTLLPTYMKEVLRFNIQENGFLSAVPYLGCWLCMILSGQAADNLRAKWNFSTLCVRRVFTLIGMIGPAVFLVAAGFIGCDYSLAV