Part of scaffold_3079 (Scaffold)

For more information consult the page for scaffold_3079 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYNJ2 ENSTTRG00000009677 (Bottlenosed dolphin)

Gene Details

synaptojanin 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009197, Bottlenosed dolphin)

Protein Percentage 91.51%
cDNA percentage 92.07%
Ka/Ks Ratio 0.21234 (Ka = 0.0152, Ks = 0.0718)

SYNJ2 ENSBTAG00000000817 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000038897, Cow)

Protein Percentage 91.13%
cDNA percentage 91.13%
Ka/Ks Ratio 0.14756 (Ka = 0.0439, Ks = 0.2972)

SYNJ2  (Minke Whale)

Gene Details

synaptojanin 2

External Links

Gene match (Identifier: BACU011764, Minke Whale)

Protein Percentage 96.79%
cDNA percentage 97.33%
Ka/Ks Ratio 0.27168 (Ka = 0.0173, Ks = 0.0638)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4404 bp    Location:148347..86315   Strand:-
>bmy_21574
CCAGAAGAAAAGGAGGTCATTAAAGGCCAGTATGGAAAGCTCACTGATGCTTATGGCTGCCTGGGAGAGCTCAGGTTGAAGTCCGGTGGCACCTCCCTGAGCTTCCTGGTTTTGGTGACGGGCTGCACATCTGTGGGCAGAATTCCAGAGGCCGAAATCTACAAAATCACCGCCACCGACTTTTACCCACTTCAGGAAGAGGCCAAGGAGGAGGACCGCCTCACAGCCTTGAGGAGGATCCTCAACTCGGGGGTCTTCTACTTCTCGTGGCCCAGCGATGGGTCTTGCTTCGACCTCACTGTCCGGGCACAGAAGCAGGGCGATGACAGCTCCGAGTGGGGCAACTCCTTCTTCTGGAACCAGCTGTTGCACGTGCCCCTGAGGCAGCACCAGGTGCGCTGCTGTGACTGGCTGCTGAAGGTCATCTGCGGGGTGGTGGCCGTCCGCACGGTGTACGCCTCTCACAAGCAGGCCAAGGCCTGCCTCATCTCCCGTATCAGCTGCGAGCGCGCCGGCGCTCGCTTCCACACCCGAGGCGTGAACGACGACGGCCATGTGTCCAACTTCGTGGAGACGGAGCAGACGATTTACATGGATGATGGCGTGTCGTCTTTTGTTCAGATCAGAGGCTCCGTTCCGCTGTTTTGGGAGCAGCCAGGGCTTCAGGTGGGTTCCCATCATCTGAGACTCAACAGAGGCCTGGAAGCCAACGCCCCTGCTTTCGACAGGCACATGGTGCTTCTCAAGGAGCAGTATGGGAAGCAAGTGGTCGTGAACCTGCTGGGGAGCAGAGGCGGAGAGGAGGTACTCAACAGAGCCTTCAAGAAGCTGCTCTGGGCTTCTTGCCACGCCGGCGACACGCCTATGATCAACTTTGACTTCCATCAGTTTGCCAAAGGCGGGAAGCTAGAGAAATTGGAGAACCTGCTGAGGCCACAGTTGAAGCTGCACTGGGATGACTTTGATGTGTTCGCCAGGGGCGAGAATGTAAGTCCACGTTTTCAGAAAGGCACTTTGCGGATGAACTGTCTCGACTGCCTGGACCGAACCAACACGGTGCAGAGCTTCATCGCCCTCGAGGTCCTCCCCCTGCAGCTTGAGAGCCTAGGGCTGAATTCAAAGCCCATTGCCGACCGCTTCGTGGAGTCCTTCAAAGCCATGTGGTCTCTGAACGGGCACAGCCTGAGCAAGATGTTCACGGGCAGCCGGGCCCTGGAAGGGAAGGCCAAGGTAGGGGCAGGCCACGGGGGGCGGGGGGCGGGTGGTGCCTGTACAGGCCCCTCTCACGGCCTGTCGTCCGGCCCGTGGCAGGTGGGGAAGCTGAAGGACGGGGCCCGGTCTGTGTCTCGCACAATCCAGTCCAACTTCTTCGACGGGGTGAAGCAGGAGGCCATCAAGCTGCTGCTGGTCGGGGACGTCTACACTGAAGAGTCTGCGGACAAAGGAAGGATGCTGCTGGACAACCAGGCCCTGCTGGTGACTCCCAGGATCCTGCGAGCCATGTCGGAGCGCCAGGCAGAGTTCACGAATTTCAAGCCGGTGCGCGTTGCCGTGGGCACCTGGAATGTGAATGGCGGGAAGCAGTTCAGGAGCAACCTGCTGGGCACTGCCGAGCTGGCTGGCTGGCTGCTGGATGCGCCCGTGTTTTCCGGAGTCTCTGGATCCCAGGATGACAGCAGCCCAGCTGACATATTTGCCGTGGGGTTTGAAGAGATGGTGGAACTGAGCGCAGGGAATATCGTCAACGCCAGTACCACCAACAGGAAGATGTGGGGTGAGCAGCTTCAGAAAGCCATCTCACGCTCTCATAGGTATATTCTCTTGACTTCGGCACAGCTGGTGGGCGTCTGTCTTTATATCTTTGTACGTCCATACCACGTCCCCTTCATCAGGGACGTGGCGATCGACACAGTGAAGACGGGCATGGGGGGAAAGGCGGGGAACAAGGGCGCCGTGGCCATCCGCTTCCAGTTCCACGGCAGCAGCTTCTGCTTCGTGTGCAGCCACCTGACGGCCGGGCAGTCCCAGGTGAAGGAGAGGAACGAGGACTACAGGGAGATCACCCAGAGGCTGAGCTTCCCGACGGGAAGAAACATTTTTTCTCACGATTATGTGTTTTGGTGCGGCGATTTCAACTACCGCATTGATCTCACGTACGAAGAAGTCTTCTATTTTGTTAAACGCCAAGACTGGAAGAAGCTCCTGGAATTTGATCAGCTACAGCTACAGAAATCAAGTGGAAAAATTTTTAAAGACTTTCACGAAGGCACCATTGACTTTGGACCCACCTACAAGTATGACGTTGGCTCTGCTGCCTATGACACAAGTGACAAATGCCGCACCCCGGCCTGGACGGACAGGGTCCTGTGGTGGAGGAAGAGGCATCCTTTTGACAGAACAGCTGGAGAACTCAACCTTCTAGACAACGATCTGGACGCTGACACCAAAGTCAGACACGCCTGGTCTCCTGGTGCCCTCAAGTATTACGGCCGAGCAGAGCTGCAAGCGTCTGACCACAGACCCGTGCTGGCCATCGTGGAGGTGGAAGTGCAAGAAGTCGATGTGGGTGCTCGGGACAGGGTGTTCCAGGAAGTGTCCTCTTTCCAGGGCCCCCGGGACGCCACTGTCGTCGTCAACCTTCAGTCGCCAACCTCCGAAGAGAAAAACGAGTTTCCCGAGGACGTGCGCACAGAGCTCATGCAGACCTTGGGCAGTTACGGGACGATCCTGCTTGTCAGGATCAACCAAGGGCAGATGCTGGTGACTTTTGCAGACAGTCACTCGGCGCTCAGCGTCCTGGATGTGGACGGAATGAAGGTGAAAGGCAGAGCCGTGAAGATTAGACCGAAGACCAAGGACTGGCTGAAAGGTTTGCAAGAGGAGATCATTGGAAAGCGGGACAGCGTGGCCTCTGTGTCCCCCACCGCCAACTCCTGTCTGCTGGAGGAAAACTTCGACTTCACGAGTCTGGATTATGAGTCAGAAGGGGATATTCTCGAAGACGACGAAGACTATTTGGTGGATGAACTGAGTCAGCCTGTGGTCTCAGATAGTGAAGCGGGGGGAGACGAGCTCGCCGATGCCCCCAGCTCCATGGCAGTGGCGCCTCCAAGCCGGTCACCGGCACTCACCAAAAAGAAGCAGCATCCAACCTACAGAGATGATGCTGAGCTGGTGGAGTTAAAGCAGGAGCTGGAAGCAGTTGGGGACTTCCGCCACCGCTCTCCAAGTCGGTCTCTGTCGGTTCCCAACAGGCCTCGGCCACCTCACCCACCGCAGAGACCCCCCCCTCCAACTGGTTTAATGGTGAAGAAGTCAGCCTCGGATGTGTCCATCTCCTCTGGCACCCACGGGCAGTATTCGATTTTGCAGACAGCAAAACTTCTGCCAGGAGCACCTCAGCAAGCACCCAAAGCTAGGACTGGGATAAGTAAGCCTTATAACGTCAAGCAGATCAAAACTACCAACGCTCAGGAGGCGGAAGCAGCAATCCGATGTCTCCTGGAAGCCAGAGGAGGCGCCCCAGGAGAAGCCCTAAATGCCACAGCCTTGAGGGACCAGGGACCTTCCAAACCAGAGCCCACAGCGGGGGTGGCCCCACTCCTGCCCCGTCGGCCCGCACCCAGAGTTCCTGCCATCAAGAAGCCAGCCTTGAGGAGGACAGGAAAGCTCGCGTCACCGGAAGAACAGTTTGGGCATCAGGCCGTCCATTTTACAATCGGGCCCCCGGAGACGAGCCTTGACACCCCTCCTCTAGCGACAGTCCCTCCCGTTCCCAAACCGAGAACACTTCAGCCCGGGAAAGGTGCCGCCGCCGCCCGGAAGCCAGCGCCGGACGAGGCCCCGACCGCGGCCGCCCCGCCCCCTCCGGAGGCCCCGCCCCTCGTGCCCCAGGTGCCCCCGCGGAGGAAGAAGTCGGCGCCGGCGGCCTTGCACCTGCAGGGGCTGCAGAGCAACTGCCAGCTTCTCCAGGAGCCACCCTGCAGCAGCCCCAGCAGCCACTGTCCCCCCGCACCCCTGCCTGCTGGGGGCGCGCTCTTCCCCCAGCCGGCTTTCCTTGGCCCTTCATCACCTGCAAGCCCTGAGGCCGATGGCACCAAGGACACGAAGTCAGAGGCCGCCCCCCTCCTCGGCGATTATCAGGATTATCAGGATCCCTTCTGGAGCCTTCTCCACCACCGTAACCTGTTGAATACCTCCTGGCTTCCCAAGAGCCCTGACCCCCTGGACTCGGGGAACAGGAACCCCGGAAGAGCACACGCAGCCCCCCAGCAAGTCAGTGCCTCACCTGCCCAGGAGCTGCCACTGGAGCACAGACAAAACGACTTCGGTCCCTGGGTGACAACCAGTGACAAGGACAAGAGGACGGTGCTGCAGGTGTTTGACCCACTGGCGAAAACATGA

Related Sequences

bmy_21574T0 Protein

Length: 1468 aa      View alignments
>bmy_21574T0
PEEKEVIKGQYGKLTDAYGCLGELRLKSGGTSLSFLVLVTGCTSVGRIPEAEIYKITATDFYPLQEEAKEEDRLTALRRILNSGVFYFSWPSDGSCFDLTVRAQKQGDDSSEWGNSFFWNQLLHVPLRQHQVRCCDWLLKVICGVVAVRTVYASHKQAKACLISRISCERAGARFHTRGVNDDGHVSNFVETEQTIYMDDGVSSFVQIRGSVPLFWEQPGLQVGSHHLRLNRGLEANAPAFDRHMVLLKEQYGKQVVVNLLGSRGGEEVLNRAFKKLLWASCHAGDTPMINFDFHQFAKGGKLEKLENLLRPQLKLHWDDFDVFARGENVSPRFQKGTLRMNCLDCLDRTNTVQSFIALEVLPLQLESLGLNSKPIADRFVESFKAMWSLNGHSLSKMFTGSRALEGKAKVGAGHGGRGAGGACTGPSHGLSSGPWQVGKLKDGARSVSRTIQSNFFDGVKQEAIKLLLVGDVYTEESADKGRMLLDNQALLVTPRILRAMSERQAEFTNFKPVRVAVGTWNVNGGKQFRSNLLGTAELAGWLLDAPVFSGVSGSQDDSSPADIFAVGFEEMVELSAGNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVKTGMGGKAGNKGAVAIRFQFHGSSFCFVCSHLTAGQSQVKERNEDYREITQRLSFPTGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHEGTIDFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKRHPFDRTAGELNLLDNDLDADTKVRHAWSPGALKYYGRAELQASDHRPVLAIVEVEVQEVDVGARDRVFQEVSSFQGPRDATVVVNLQSPTSEEKNEFPEDVRTELMQTLGSYGTILLVRINQGQMLVTFADSHSALSVLDVDGMKVKGRAVKIRPKTKDWLKGLQEEIIGKRDSVASVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDELSQPVVSDSEAGGDELADAPSSMAVAPPSRSPALTKKKQHPTYRDDAELVELKQELEAVGDFRHRSPSRSLSVPNRPRPPHPPQRPPPPTGLMVKKSASDVSISSGTHGQYSILQTAKLLPGAPQQAPKARTGISKPYNVKQIKTTNAQEAEAAIRCLLEARGGAPGEALNATALRDQGPSKPEPTAGVAPLLPRRPAPRVPAIKKPALRRTGKLASPEEQFGHQAVHFTIGPPETSLDTPPLATVPPVPKPRTLQPGKGAAAARKPAPDEAPTAAAPPPPEAPPLVPQVPPRRKKSAPAALHLQGLQSNCQLLQEPPCSSPSSHCPPAPLPAGGALFPQPAFLGPSSPASPEADGTKDTKSEAAPLLGDYQDYQDPFWSLLHHRNLLNTSWLPKSPDPLDSGNRNPGRAHAAPQQVSASPAQELPLEHRQNDFGPWVTTSDKDKRTVLQVFDPLAKT*