Part of scaffold_3107 (Scaffold)

For more information consult the page for scaffold_3107 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDZRN4 ENSTTRG00000007447 (Bottlenosed dolphin)

Gene Details

PDZ domain containing ring finger 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007046, Bottlenosed dolphin)

Protein Percentage 97.02%
cDNA percentage 97.65%
Ka/Ks Ratio 0.32205 (Ka = 0.0127, Ks = 0.0395)

PDZRN4 ENSBTAG00000012624 (Cow)

Gene Details

PDZ domain-containing RING finger protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016758, Cow)

Protein Percentage 94.79%
cDNA percentage 93.95%
Ka/Ks Ratio 0.1214 (Ka = 0.0232, Ks = 0.191)

PDZRN4  (Minke Whale)

Gene Details

PDZ domain containing ring finger 4

External Links

Gene match (Identifier: BACU002217, Minke Whale)

Protein Percentage 98.12%
cDNA percentage 98.33%
Ka/Ks Ratio 0.26837 (Ka = 0.0069, Ks = 0.0259)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1914 bp    Location:146761..127522   Strand:-
>bmy_21618
TTTTTCTCTCAGGAGGTCGAGTTGTGTCGTGTTAACAGTCAAGAGAAGCTGGGCCTGACAGTCTGTTACCGAACGGATGATGAAGAAGACACCGGCATTTATGTCAGCGAGGTAGATCCAAACAGCATTGCTGCCAAAGATGGCCGGATTCGAGAAGGGGATCGTATTTTGCAAATAAATGGGGAAGAYGTCCAGGATCGAGAGGCGGCGGTGGCCCTGCTGTCTAGTGATGAGTGCCGGAGAATCGTGCTGCTGGTCGCAAGGCCGGAGAGTCAGCTGGATGAAGGCTGGCTGGAAGATGAAAGGAATGAATATTTAGAGGAGTTAAACTTGTCGATGTTGGAAGAACAGCATAATGAAGCAATGCAGYGCACTGCCGGTGAGATGGAGCAGCCRAAAAAACAAGAAGAAGAAGAAGGCACAACAGACACRGCAACATCTTCATCCAACAACCATGAGAAGGACAGTGGAGTGGGGCGCACAGATGAAAGCTTGCGGAACGATGAGAGCTCAGAGCAGGAGAATGCAGCCGAGGATCCCAATGGCACATCTTTGAAGAGCAAGAGAGAGCTGGGGCAGAGCCAAGACACTCTGGGAAGCGTTGAACTTCAGTGCAATGAGAGCTTCGTGTCTGGTGAATACATTGACTCAGACTGTRTTGGCAACCAAGATGAGGAGTGCGAAAGGTTTCGGCAGCTCTTGGAGCTCAAATGCAAGATTCGGAAGCATGGAGAGTATGACCTGTATTACTCAAGCAGCACAATAGAATGCAATCAAGGGGGACGAGAGGGAGTGGAGCACGAACTACAGTTGCTTAATGAAGAACTAAGAAACATTGAACTTGAGTGCCAAAATATCATGCAGGCTCACAGGCTCCGGAAAGTGACAGACCAGTATGGAGACRTCTGGGCATTGCAYGATGGAGGATTCCGAAATTATAACACCAGCATAGATACGCAGAGGGGAAAACTAGATGACATCCTYGAACACCCAGAAAAGTCAGACAAAGACAGTTCTAGTGCTTACAACACAGCTGAAAGCTGCAGAAGCACTCCACTCACTGTGGACCGTTCCCCTGACAGTTCCCTCCCAAGAATGATCAACCTCACCAATAAGAAAAACCTGAGAAGCACAATGGCAGCCAATCAGTCCTCTTCTGGACAGAGTAGTAAAGAGTCAACCAAAGCCAAAACCACTGAACAAGGTTGCGGCGTTGAAGGCAAAGAGAAGASTTCAGAAAGCAGCAAGCTTTCTGATCCAGAGAAGACCAGCGGTGAACACATCCCTTACCTCTCTCCTTACCACAGCTCCTCCTATAGATATGCAAACATCCCAGCACATGCCCGGCATTATCAAAGCTACATGCAGTTAATTCAACAGAAGTCCGCAGTCGAGTTCGCTCAGAGTCAGCTCAGCTTGGTGAGCGTGTGCAAGGAGTCTCAGAAGTGCTCAGAACCCAAGATGGAATGGAAGGTGAAAATCAGGAGTGACGGGACACGGTACATCACCAAGAGACCCGTGAGGGACCGCATTCTGAAGGAGCGTGCCTTAAAGATCAAGGAGGAGCGGAGTGGCATGACGACGGACGATGACACCATGAGTGAGATGAAAATGGGGCGCTACTGGAGCAAAGAGGAGAGGAAGCAACACCTGGTGCGAGCCAAAGAGCAGCGGCGCCGCCGAGAGTTCATGATGCGGAGCCGGTTGGAGTGTCTCAAGGAGAGTCCCCAGAGCGGCAGCGAGGGCAAGAAGGAGGTCAACATCATTGAACTGAGTCACAAAAAGATGATGAAGAAGAGAAACAAGAAAATTTTGGACAACTGGATGACAATCCAAGAACTGATGACCCATGGGGCCAAGTCCCCTGATGGCACACGTGTTCCTAATGCCTTTTTGTCAGTCACCACGGTATGA

Related Sequences

bmy_21618T0 Protein

Length: 638 aa      View alignments
>bmy_21618T0
FFSQEVELCRVNSQEKLGLTVCYRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQDREAAVALLSSDECRRIVLLVARPESQLDEGWLEDERNEYLEELNLSMLEEQHNEAMQXTAGEMEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNGTSLKSKRELGQSQDTLGSVELQCNESFVSGEYIDSDCXGNQDEECERFRQLLELKCKIRKHGEYDLYYSSSTIECNQGGREGVEHELQLLNEELRNIELECQNIMQAHRLRKVTDQYGDXWALHDGGFRNYNTSIDTQRGKLDDILEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSTMAANQSSSGQSSKESTKAKTTEQGCGVEGKEKXSESSKLSDPEKTSGEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEFAQSQLSLVSVCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEVNIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVPNAFLSVTTV*