Part of scaffold_3098 (Scaffold)

For more information consult the page for scaffold_3098 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TLR5 ENSBTAG00000000477 (Cow)

Gene Details

toll-like receptor 5 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000604, Cow)

Protein Percentage 83.96%
cDNA percentage 89.19%
Ka/Ks Ratio 0.55052 (Ka = 0.0989, Ks = 0.1796)

TLR5  (Minke Whale)

Gene Details

toll-like receptor 5

External Links

Gene match (Identifier: BACU004018, Minke Whale)

Protein Percentage 96.46%
cDNA percentage 98.47%
Ka/Ks Ratio 1.41397 (Ka = 0.0173, Ks = 0.0122)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2547 bp    Location:131656..134202   Strand:+
>bmy_21621
ATGGTGCTCATGGCCAGTCCCGCGCTTGGAATTTCTTCCTGCTTCTTCGATGGTTGGAGAGCCTTATATCGTTTCTGCAACCTCACCCAAGTCCCCCAGGTCCCCAGCACCACCAAGAGCCTCCTGCTCAGCTTCAACTACATCAGGACAGTCACAACCGCGTCCTTCCCCTTCCTGGAGCAGCTGCAGCTGCTGGAGCTCGGGACTCAGTTTACCCCCTTGACCATTGACAAAGAAGCCTTCCAAAACCTGCCCAATCTCAGAATCTTGGACCTGGGCAAAAGTCAGATAGACTTCTTGCACCCAGATGCTTTTCAGGAACTGCCCCATCTCTCCGAACTTCGACTGTTTTACTGTGGTCTCTCCAGTGCTGTATTAAAAGATGGCTATTTCAGAAACTTGGGGTCTTTGACTCACTTGGACCTATCCAAAAATCGGATTCAGAGTCTTTACCTTCATCCTTCATTCGGGGAATTGAATTCCTTGAAGTCCATCGATCTTTCCCTCAACCAAATAACCACTGTATGTGAGCACGAGCTCAAACCCCTCCAGGGAAAAACACTCTCCTTTTTAAGCCTTGCTGATAATAACCTGTACAACAGGGTCTCAGTGGACTGGGGGAAATGTCTGAACCCATTCAGAAACATGGTCCTGGAAACCCTAGATGTTTCTGGCAATGGCTGGGCAGTGGACGTCACAAGAAACTTCAGCAATGCCATCAATGGAAGCCAGATTTTCTCTTTGGTTCTTACCTATCACGTGATGGGTCCTGGGTTTGGCTTCACTAACATCAAAGATCCTGACCAGCACACCTTTGCTGGTCTGGCCAGAAGCTCAGTGATACAGCTGGACCTTTCACATGGGTTTATCTTCTCCCTGAACTTCCAACTCTTTGAGACGCTCAAGGAGTTGAAGATTCTGAACCTCGCCTACAACAAGATAAACAATATTGCAGGCAAAGCATTTTATGGACTCGACAACCTCCAAGTTCTCAATATATCACATAACCTTCTGGGGGAATTGTATAGTTCTAATTTCTATGGACTACCTAAGGTAGCCTATATTGATCTGCAAAAGAATCACATCGGGATCATTCAGGACCAAACATTCAGATTCCTGGAGAAATTAAACACCTTGGATCTCCGGGATAATGCTCTTAAAACTATTTCTTTTCTTCCGAGCATACCTAATATCTTCTTGAGTGGCAATAAACTGGCTACTTTGCCGAACATCGCACTTACAGCTAACTTCATCATCTTATCAGAGAATAGGCTGGAAAATCTGGATAATCTCTACTTCCTTCTCCAGGTACCTCATCTCCGGATTCTCATTTTAAATCAAAATCGCTTTTCCTTTTGTAACCAAGACCATGCCCCTTCAGAGAGCCACAGCTTAGAAGAGCTTTTCCTTGAAGAAAATATGTTGCAGCTTGCCTGGGGAGCCGGGTTCTGCTGGGATGTTTTTAAGGGGCTTTCGCATCTCCGAGTCCTGTATTTGAATAGAAACTACCTGAATTTCCTTCCACCAGGAGTATTTCGTCATCTGATTGCACTGAGGGGACTCAGCCTCAAGGACAACAGCCTGACCGTTCTTTTTCCTGGCGACTTACCTGCTAATTTAGAGGTCCTGGATTTATCCAGAAACCAGCTCCTCTCTCCTGATCCTGATTTATTTGCATCGCTGAGTGCCGTGGACATAACTCATAACAAGTTCATCTGTGAGTGCGAACTTAGCACTTTTATCAGTTGGCTCAATCAAACCAACGTCACAATATTTGGCTCTCCGGCAGACATATACTGCATGTACCCGAGCTCCATGGCTGGGACTTCCCTCTACTCTCTTTCCACGGAAGATTGTGATGAAGAGGAAGTTTTAAAGTCCCTAAAGTTTTCCCTTTTCATCTTCTTCACTGTCACTTTGACTCTGTTCCTCGTGGCCATCCTCATCGTTACGAAGTTTCGGGGGGTTTTTTTCATCTGTTATAAGAAAGCCCAGAGACTGGTGTTCAAGGACCCCATCAAGGGAAGAGAATCAGAGACGTACAAATACGATGCCTATTTGTGCTTCAGTAGCAAAGACTTTGAATGGGTGCAGAATGCTTTGCTCAAAAACCTAGATGCCCAGTACAGCGACCAAAACAGATTTAACCTGTGCTTTGAAGAGAGAGACTTTTTGCCCGGGGAAACCCGCATCACCAACATCCAGGATGCCCTGTGCAACAGCAGAAAGGTTGTCTGTCTCGTGAGCAGACACTTCCTTAGAGACGGGTGGTGCCTCGAAGCCTTCAGTTACGCCCAGAGCATGTGCTTAGCTGACCTCAGTGGCGCCCTCATCCTGGTGGTGGTGGGGTCCCTGTCCCAGTACCAGCTGATGAAGCATCGCTCCATCAGAGGATTCGTCCACAAACAGCAGTACTTGAGGTGGCCTGAGGATCTCCAGGATGTTGGCTGGTTTCTCGACAAACTCTCTCAGTGCATTCTAAAGAAAGAAAAGGAAAGGAAGAAAGACAATGACATCCAGCTGCAAAGTGTAACAACCATTTCCTAG

Related Sequences

bmy_21621T0 Protein

Length: 849 aa      View alignments
>bmy_21621T0
MVLMASPALGISSCFFDGWRALYRFCNLTQVPQVPSTTKSLLLSFNYIRTVTTASFPFLEQLQLLELGTQFTPLTIDKEAFQNLPNLRILDLGKSQIDFLHPDAFQELPHLSELRLFYCGLSSAVLKDGYFRNLGSLTHLDLSKNRIQSLYLHPSFGELNSLKSIDLSLNQITTVCEHELKPLQGKTLSFLSLADNNLYNRVSVDWGKCLNPFRNMVLETLDVSGNGWAVDVTRNFSNAINGSQIFSLVLTYHVMGPGFGFTNIKDPDQHTFAGLARSSVIQLDLSHGFIFSLNFQLFETLKELKILNLAYNKINNIAGKAFYGLDNLQVLNISHNLLGELYSSNFYGLPKVAYIDLQKNHIGIIQDQTFRFLEKLNTLDLRDNALKTISFLPSIPNIFLSGNKLATLPNIALTANFIILSENRLENLDNLYFLLQVPHLRILILNQNRFSFCNQDHAPSESHSLEELFLEENMLQLAWGAGFCWDVFKGLSHLRVLYLNRNYLNFLPPGVFRHLIALRGLSLKDNSLTVLFPGDLPANLEVLDLSRNQLLSPDPDLFASLSAVDITHNKFICECELSTFISWLNQTNVTIFGSPADIYCMYPSSMAGTSLYSLSTEDCDEEEVLKSLKFSLFIFFTVTLTLFLVAILIVTKFRGVFFICYKKAQRLVFKDPIKGRESETYKYDAYLCFSSKDFEWVQNALLKNLDAQYSDQNRFNLCFEERDFLPGETRITNIQDALCNSRKVVCLVSRHFLRDGWCLEAFSYAQSMCLADLSGALILVVVGSLSQYQLMKHRSIRGFVHKQQYLRWPEDLQDVGWFLDKLSQCILKKEKERKKDNDIQLQSVTTIS*