Sequence detailsbmy_21623 (Coding sequence)

Part of scaffold_3124 (SequenceType object (1))

For more information consult the page for scaffold_3124 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

S100ZENSTTRG00000004749 (Bottlenosed dolphin)

Gene Details

S100 calcium binding protein Z

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004475, Bottlenosed dolphin)

Protein Percentage 90.7%
cDNA percentage 94.19%
Ka/Ks Ratio 0.58865 (Ka = 0.0483, Ks = 0.0821)

S100ZENSBTAG00000020201 (Cow)

Gene Details

protein S100-Z

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000026904, Cow)

Protein Percentage 91.21%
cDNA percentage 91.21%
Ka/Ks Ratio 0.21823 (Ka = 0.0479, Ks = 0.2194)

S100Z (Minke Whale)

Gene Details

S100 calcium binding protein Z

External Links

Gene match (Identifier: BACU006178, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.05%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0129)

Additional orthologs identified in other species via the OPTIC pipeline.

S100Z (Human)   S100z (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 294 bp    Location:85762..83617   Strand:-
Raw sequence 
>bmy_21623
ATGGACACCATGATTAGAATCTTCCACCGCTACTCCTGCAAGGAAGGGGACAGGTTCAAGATCAACAAGGGGGAACTGAAAATGCTCCTGCAGCGAGATCTCACAGAATCCCTCTCGTGTCAAAAGGATCCCGAGTTGGTTGATAAGATAATGCAGGACCTGGATGCCAATAAGGACAAYGAAGTGGATTTTAATGAATTTGTGGTCACAGTGGCAGCTCTGACAGTTGCTTGTAATGATTACTTTGTAGAACAATTGAAGAAGAAAGGAAAGACAAGTAGTAAGCTAATCTAA

Related Sequences

bmy_21623T0 SequenceType object (3)

Length: 98 aa      View alignments
>bmy_21623T0
MDTMIRIFHRYSCKEGDRFKINKGELKMLLQRDLTESLSCQKDPELVDKIMQDLDANKDNEVDFNEFVVTVAALTVACNDYFVEQLKKKGKTSSKLI*