Part of scaffold_3166 (Scaffold)

For more information consult the page for scaffold_3166 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LHFPL2 ENSTTRG00000012959 (Bottlenosed dolphin)

Gene Details

lipoma HMGIC fusion partner-like 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012292, Bottlenosed dolphin)

Protein Percentage 83.62%
cDNA percentage 88.14%
Ka/Ks Ratio 0.43129 (Ka = 0.1065, Ks = 0.247)

LHFPL2 ENSBTAG00000007374 (Cow)

Gene Details

lipoma HMGIC fusion partner-like 2 protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009698, Cow)

Protein Percentage 80.23%
cDNA percentage 83.8%
Ka/Ks Ratio 0.22497 (Ka = 0.1229, Ks = 0.5462)

LHFPL2  (Minke Whale)

Gene Details

lipoma HMGIC fusion partner-like 2

External Links

Gene match (Identifier: BACU006168, Minke Whale)

Protein Percentage 84.18%
cDNA percentage 88.14%
Ka/Ks Ratio 0.41834 (Ka = 0.1036, Ks = 0.2477)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 534 bp    Location:73629..71849   Strand:-
>bmy_21659
ATGTGTCATGTCATTGTCACCTGTCGCTCGATGCTCTGGACCCTCCTGAGTATTGTGGTGGCGTTCGCCGAGCTCATTGCCTTCATGAGCGCAGACTGGCTGATTGGAAAAGCCAAGCCCCGCGGCAGCGCCGAGCCCGGCGAGCAGGGCGGAGGCTCCCMGGAGCCCCACCACCCCACGCTGGGCATCTACGCCCGCTGCATCCGGAACCCCGGCGTGCAGCACTTCCAGCGGGAGACGCTGTGCGGGCCCTACGCCGAGACCTTCGGAGAGATCGCCAGCGGCTTCTGGCAGGCCACCGCTATTTTCTTAGCCGTGGGCATCTTCATTCTCTGCATGGTGGCCCTGGTGTCTGTCTTCACCATGTGTGTGCAGAGCATCATGAAGAAAAGTATTTTCAACGTCTGCGGGCTGCTGCAAGGAATTGCAGGGGGCCCCATGTGTGTATGTGGGGGAGAGGGTAATGGGCCCAGAGAAATGACAGAGGACCTGCTTCACAGTCATGCTCTGTTTCAATGGGGGATATACTCGTGA

Related Sequences

bmy_21659T0 Protein

Length: 178 aa      View alignments
>bmy_21659T0
MCHVIVTCRSMLWTLLSIVVAFAELIAFMSADWLIGKAKPRGSAEPGEQGGGSXEPHHPTLGIYARCIRNPGVQHFQRETLCGPYAETFGEIASGFWQATAIFLAVGIFILCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGGPMCVCGGEGNGPREMTEDLLHSHALFQWGIYS*