Part of scaffold_3164 (Scaffold)

For more information consult the page for scaffold_3164 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP10 ENSTTRG00000012001 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 10

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011380, Bottlenosed dolphin)

Protein Percentage 90.03%
cDNA percentage 91.56%
Ka/Ks Ratio 0.4668 (Ka = 0.0365, Ks = 0.0783)

USP10 ENSBTAG00000009446 (Cow)

Gene Details

Ubiquitin carboxyl-terminal hydrolase 10

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012432, Cow)

Protein Percentage 93.16%
cDNA percentage 91.85%
Ka/Ks Ratio 0.14245 (Ka = 0.0351, Ks = 0.2464)

USP10  (Minke Whale)

Gene Details

ubiquitin specific peptidase 10

External Links

Gene match (Identifier: BACU004334, Minke Whale)

Protein Percentage 97.49%
cDNA percentage 98.38%
Ka/Ks Ratio 0.44899 (Ka = 0.0122, Ks = 0.0272)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2466 bp    Location:68657..129830   Strand:+
>bmy_21663
ATGGGCCAAGTGCCTGAGTGGCGGAAGGACAGCATGGCCCTGCCTGGCGGAGGGCACAGTACACAGACGGTCGTCTGGCTAGAGTCTGGCAGGTGCTCCAAGTATATTTTTGGAGATTTTAGCCCTGATGAATTCAATCAGTTCTTTGTGACTCCTCGCTCTTCAGTTGAGCTTCCTCCGTACGGTGGAGCAGTTCTGTGTGGCGCGCAGGCCGCTGGTGAGCTACCCGATGGACAGGACTGTCAGAGAATTGAATTTGGTGTTAATGAAGTAATTGAACCCAATGACACTTTGCTGAGAACTCCCAACTACAGTATTTCAAGCACATTGAATCCTCAGGCCCCTGAATTTATCCTTAGTTGCACAACTTCCAAAAAGATCCCCAATGACATCGATAAAGAAGTGAACTACAGCCCAGCTGACTGCCAGTACCCAGGCTCTGCCCTCGCGCTGGATGGCAGCTCTAACGCGGAGGCGGAAGGTTTAGAGAACGATGGCGTCTCGGGTGGTCTTGGACAACGGGAGCGTAAAAAGAAGAAAAAACGCCCCCCTGGATATTACAGTTACTTGAAAGACGGCGGCGAGGGTGGTCCTTCCACAGAAGCCCTGGTCAATGGCCATGCCGGTCCAGCAGTCCCCAACAGTGTAGGCACGGAGGATGTGGACTCGATGGGTGATGTGCCCCCCGTGGGGACACCCAGGACTTGGGGCAGCCCCCAGGACACCACGGACTTCGTCAGCGACGCCGTGCCAGCTGGTTCTTTCCCCGGAGCCCTTGACAGCGGGGCCAGGACTGCAGGGCAGCCTGAGGGCTGCCCCGGGGCCAACTTGGAGCCCTCTCGCCTCCCTGCAGAGGCCAGCAGGGACACCCTGTTGAGGACAGCTGTGGCTCAGCCTGCCGTTGGGACCGATACTACTGAGAACCTTGGAGTCACTAACGGACAAATACTTGAATCCTTGGTTGAGGGCACAGCTGCCAACGGGGTGGAGTTGCACACTGTGGAGAGCTCGGACTCGGACCCCGCCAAGGCCGAGAGCGGCCCCCCTCCCGCGGACGCCCCGGCCTCTGCGGCAGCCACCGCTCCTGCCGGTCAGAGTCAGCCCGCCAAGTCGTGGGCCAGCCTCTTTCATGATTCCAAGCCCTCTTCCTCCTGCTCCTCCTCCTCGCCTGTGGTTTCCATGGAAACTAAGTATTCCCCTCCCGCCTCATCTTCCCTGGTCTCTGAAAAGCAGGCCGAAGCCAAGGAAGGGCTGGTTCCAGTTTCAGAAGATCCTGTAGCCATAAAGATTGCAGAGTTACTGGAGAACGTAACCCTGATTCATAAACCAGTGTCATTGCAACCCCGCGGGCTGATCAATAAAGGAAACTGGTGCTACATTAATGCTACACTGCAGGCATTGGTTGCTTGCCCTCCGATGTATCACCTGATGAAGTTCATTCCTCTGTATTCAAAAGTGCAAAGGCCTTGTACGTCCACACCCATGATAGATAGCTTTGTTCGGCTAATGAATGAGTTTACTAATATGCCAGTACCTCCAAAACCCAGACAAGCTCTTGGGGATAAAATCGTGAGGGATATCCGCCCTGGAGCTGCCTTTGAACCCACGTATATTTATAGACTTCTGACAGTTATCAAGTCGAGCCTGTCTGAAAAGGGTCGACAAGAAGATGCTGAGGAGTACTTAGGCTTCATTCTAAATGGACTTCATGAGGAAATGCTGAACCTGAAGAAACTTCTCTCACCAAATAATGAAAAACTTACTGTTTCCAATGGACCCAGAAGCCACTCAGTGAACGAAGACGAGCAGGAAGAACCAGGCGAAGGAAGTGAGGACGAATGGGAGCAAGTGGGCCCCCGAAACAAGACTTCGGTCACTCGCCAGGCGGATTTTGTTCAGACCCCCATCACTGGCATTTTTGGTGGCCACATCAGGTCTGTGGTTTACCAGCAGAGTTCAAAAGAATCTGCCACCCTGCAGCCGTTCTTCACGCTGCAGCTGGATATCCAGTCGGACAAGATACGCACCGTCCAGGATGCGTTGGAAAGCCTGGTGGCAAGAGAGTCTGTTGAGATCAGTCGAAGGGTGACTCTGGAAAAGCTCCCTCCTGTCCTCGTGCTGCACCTGAAACGGTTTGTTTACGAGAAGACAGGTGGATGTCAGAAGCTTATCAAAAATATTGAATATCCTGTGGACTTGGAAATTAGTAAAGAACTGCTCTCTCCAGGGGTTAAAAATAAGAATTTTAAATGCCACAGAACCTATAGGCTATTTGCAGTGGTCTACCACCACGGCAGCAGCGCCACGGGCGGCCACTACACCACGGACGTCTTCCAGATCGGTCTCAACGGCTGGCTGCGCATCGACGACCAGACGGTCAAGGTGATTAACCAGTACCAGGTGGTGAAGCCCGCTGCCGAGCGCACAGCCTACCTCCTGTATTACCGCCGCGTGGACCTGCTGTAG

Related Sequences

bmy_21663T0 Protein

Length: 822 aa      View alignments
>bmy_21663T0
MGQVPEWRKDSMALPGGGHSTQTVVWLESGRCSKYIFGDFSPDEFNQFFVTPRSSVELPPYGGAVLCGAQAAGELPDGQDCQRIEFGVNEVIEPNDTLLRTPNYSISSTLNPQAPEFILSCTTSKKIPNDIDKEVNYSPADCQYPGSALALDGSSNAEAEGLENDGVSGGLGQRERKKKKKRPPGYYSYLKDGGEGGPSTEALVNGHAGPAVPNSVGTEDVDSMGDVPPVGTPRTWGSPQDTTDFVSDAVPAGSFPGALDSGARTAGQPEGCPGANLEPSRLPAEASRDTLLRTAVAQPAVGTDTTENLGVTNGQILESLVEGTAANGVELHTVESSDSDPAKAESGPPPADAPASAAATAPAGQSQPAKSWASLFHDSKPSSSCSSSSPVVSMETKYSPPASSSLVSEKQAEAKEGLVPVSEDPVAIKIAELLENVTLIHKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVIKSSLSEKGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTVSNGPRSHSVNEDEQEEPGEGSEDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKPAAERTAYLLYYRRVDLL*