Part of scaffold_3184 (Scaffold)

For more information consult the page for scaffold_3184 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRIQ4 ENSTTRG00000001887 (Bottlenosed dolphin)

Gene Details

leucine-rich repeats and IQ motif containing 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001769, Bottlenosed dolphin)

Protein Percentage 95.54%
cDNA percentage 97.26%
Ka/Ks Ratio 0.57489 (Ka = 0.0222, Ks = 0.0385)

LRRIQ4 ENSBTAG00000006415 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008412, Cow)

Protein Percentage 76.32%
cDNA percentage 81.08%
Ka/Ks Ratio 0.47943 (Ka = 0.1454, Ks = 0.3032)

LRRIQ4  (Minke Whale)

Gene Details

leucine-rich repeats and IQ motif containing 4

External Links

Gene match (Identifier: BACU017831, Minke Whale)

Protein Percentage 97.86%
cDNA percentage 98.57%
Ka/Ks Ratio 0.41815 (Ka = 0.0097, Ks = 0.0232)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1818 bp    Location:84831..71295   Strand:-
>bmy_21667
ATGTCAAATGATAGCACAAAATCAGAACATTCATCTAGAATTCATCAGAAAAATGATCCACAGCAGGTCTCTGATAGAACATTTTTCATTGACGCTTCTAATCAGAGCTTGCTTACCATTCCAGCGGAGATTTTAGGCTTACCAGAATTAGAAGAAGTGCATCTGGAAAACAACCAGATTGCAGAAATCCCCAAGGATATTCAGCATTTAAGGAATGTCAGGATCCTCTACCTGAACAAGAACAAGCTGAAGAATCTGTGCCCCGAGCTGGGGAAGCTGAGCAACCTGGAGGGCCTGGACCTGAGCGACAACCCGCTCCTGGCCTCGTCCCTTCGGGTCCTCAGCGGCATCCGCAAGTTGCGTGAGCTCCGCCTCTACCGCACGGACCTGGCGGAGATCCCCATCCTCGTCTGTAAACACCTTCACCACCTCGAGCTGCTCGGACTGGCGGGAAACCACCTGAAATCTCTGCCCAAGGAAATGGTGAACCAGACCAAACTGAGGGAGATCCACCTGAAGCGAAACCAATTTGAAGTTTTCCCTCTGGAGCTGTGTGGTCTCTACAACCTGGAGATCATCGACCTGGATGAGAACAAGCTAAGTGTCATCCCAGAAGAGATTGGGAACCTGACGAAGCTGCAGAAGTTCTACGTGGCGTACAACAGCCTGCCTGTTCTCCCGGAGTCGCTGTGCCAGTGTTCCAAGCTGTCGGTGCTGGATTTATCCCACAATCGCCTCCACTCCATCCCGCACACCCTGGCCGAGCTCTCGCAGGTGACGGAGATTGGGCTGAGCGGGAACCACCTGGAGAAGGTGCCGCACCTCCTCTGCAGGTGGACCTCGCTGCACCTGCTCTACCTGCACAACACCGGCCTGCGGGTGCTGCGCCGCCCTTTCCGACGCCTGGTTAACCTGCGCTTCCTCGATCTCAGCCAGAACTATCTGGAACGCTGTCCGTTGCAGATCTGTGAGCTGCAGAACCTGGAAATCCTGGCGCTGGATGATAATAAAATATGCCAGGTACCGATTCCCTTCCTGGCTGTCACTGTGCTCCCACCGAGGGCCCTTCCGGCCCTAAATTGGTGTAGTTCTGTGTCTAAACATCAGGAAATTCGAACTGAGTTTATGAAGAGTTTCAAAACTGCCTTTCAGGAATTACCTTCAGACTTTGGTTTACTTTCAAAACTGAAGATTCTTGGACTAACTGGAAATCAGTTTTCTTCCTTTCCAGAAGAAATCCTTTCTTTAGAGTCTTTAGAGAAATTATACATTGGCCAAGATCAGGGAGCCAAGCTTACCCATATGCCAGAATGCATTAGGAAACTACAGAGTCTTAAAGAGCTGTATGTAGAGAACAATTATCTCAAGTACCTGCCTGTATCCTTGGGATCAATGCCCAACTTGGAAATTCTTGATTGCCGCTGCAATCTGATTAAGCAACTTCCAGATGCCATTTGCCAAGCACAAGCTTTGAAAGAATTACGGCTCGAGGACAACTTGATCACCCATCTTCCAGAGAATTTGGATAGTCTAGTGAATCTAAAAGTTCTGACACTGATGGGCAATCCCATGGAAGAACCCCCAATGAKAGCGTGTGCCGAAGGCGCTGAGGCTGTATGGGCATACCTTAAAGAAAGAAGAAATATGAAGACAATGGCAACAAAGATTCAGGCATGGTGGCGTGGAATAATGGTACGCAAAGGATTTGGGAAATTTGAAGACCTGCTGAAATTGCAAAAGAAGGGAAGGTATTCTCCAAAAGATAAGAAAGGAAAGAAGGATGTAAAAGGAAAATCTGTAAAGAAAAATAAGAAATAA

Related Sequences

bmy_21667T0 Protein

Length: 606 aa      View alignments
>bmy_21667T0
MSNDSTKSEHSSRIHQKNDPQQVSDRTFFIDASNQSLLTIPAEILGLPELEEVHLENNQIAEIPKDIQHLRNVRILYLNKNKLKNLCPELGKLSNLEGLDLSDNPLLASSLRVLSGIRKLRELRLYRTDLAEIPILVCKHLHHLELLGLAGNHLKSLPKEMVNQTKLREIHLKRNQFEVFPLELCGLYNLEIIDLDENKLSVIPEEIGNLTKLQKFYVAYNSLPVLPESLCQCSKLSVLDLSHNRLHSIPHTLAELSQVTEIGLSGNHLEKVPHLLCRWTSLHLLYLHNTGLRVLRRPFRRLVNLRFLDLSQNYLERCPLQICELQNLEILALDDNKICQVPIPFLAVTVLPPRALPALNWCSSVSKHQEIRTEFMKSFKTAFQELPSDFGLLSKLKILGLTGNQFSSFPEEILSLESLEKLYIGQDQGAKLTHMPECIRKLQSLKELYVENNYLKYLPVSLGSMPNLEILDCRCNLIKQLPDAICQAQALKELRLEDNLITHLPENLDSLVNLKVLTLMGNPMEEPPMXACAEGAEAVWAYLKERRNMKTMATKIQAWWRGIMVRKGFGKFEDLLKLQKKGRYSPKDKKGKKDVKGKSVKKNKK*