Part of scaffold_3187 (Scaffold)

For more information consult the page for scaffold_3187 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF13 ENSTTRG00000003454 (Bottlenosed dolphin)

Gene Details

ring finger protein 13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003239, Bottlenosed dolphin)

Protein Percentage 79.06%
cDNA percentage 79.93%
Ka/Ks Ratio 0.33154 (Ka = 0.0439, Ks = 0.1324)

RNF13 ENSBTAG00000011147 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF13

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014803, Cow)

Protein Percentage 83.68%
cDNA percentage 86.14%
Ka/Ks Ratio 0.2727 (Ka = 0.1055, Ks = 0.3867)

RNF13  (Minke Whale)

Gene Details

ring finger protein 13

External Links

Gene match (Identifier: BACU012805, Minke Whale)

Protein Percentage 83.25%
cDNA percentage 86.56%
Ka/Ks Ratio 0.61897 (Ka = 0.1371, Ks = 0.2215)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 576 bp    Location:95013..63067   Strand:-
>bmy_21691
ATGTTTTTGTCAGAATCACAAAATTTGTCCAGGATAGACATAGAGCTAGAAGAAACAGACTTCGTAAAGATCAACTTAAGAAACTCCCTATACATAAATTCAAAAAAGAGTGTTTTGGTTATCGTAAAAGGAGATGAGTATGATGTATGTGCCATTTGTTTGGATGAATATGAAGATGGAGACAAGCTCAGAATCCTTCCGTGTTCCCATGCTTATCATTGCAAGTGTGTAGATCCTTGGCTAACTAAAACCAAAAAAACCTGTCCAGTCTGCAAGCAAAAAGTTGTTCCTTCTCAAGGCGATTCAGACTCTGACACAGATAGTAGTCAAGAAGAAAATGAAGTGTCAGAACATACCCCTTTACTCAGACCTTTGGCTTCTGTCAGCACCCAGTCATTTGGGGCTTTGTCGGAATCCCGCTCACATCAGAACATGACAGAATCTTCAGACTATGAGGAAGAGGACAATGAAGATACCGACAGTAGTGATGCAGAAAACGAAATTAATGAACATAGTGTTGTGGTCCAACTGCAGCCTGATGGTGAACAGGATTACAACATAGCAAACACTGTTTGA

Related Sequences

bmy_21691T0 Protein

Length: 192 aa      View alignments
>bmy_21691T0
MFLSESQNLSRIDIELEETDFVKINLRNSLYINSKKSVLVIVKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVSEHTPLLRPLASVSTQSFGALSESRSHQNMTESSDYEEEDNEDTDSSDAENEINEHSVVVQLQPDGEQDYNIANTV*