Part of scaffold_3226 (Scaffold)

For more information consult the page for scaffold_3226 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UBE3D ENSTTRG00000007778 (Bottlenosed dolphin)

Gene Details

ubiquitin protein ligase E3D

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007347, Bottlenosed dolphin)

Protein Percentage 90.52%
cDNA percentage 92.53%
Ka/Ks Ratio 0.69068 (Ka = 0.0718, Ks = 0.1039)

UBE3D ENSBTAG00000019418 (Cow)

Gene Details

E3 ubiquitin-protein ligase E3D

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000037931, Cow)

Protein Percentage 81.9%
cDNA percentage 86.49%
Ka/Ks Ratio 0.48308 (Ka = 0.12, Ks = 0.2485)

UBE3D  (Minke Whale)

Gene Details

ubiquitin protein ligase E3D

External Links

Gene match (Identifier: BACU000537, Minke Whale)

Protein Percentage 90.09%
cDNA percentage 92.24%
Ka/Ks Ratio 0.88216 (Ka = 0.0761, Ks = 0.0863)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 696 bp    Location:891..21550   Strand:+
>bmy_21692
AAGCTCCTGAGGCTGCTCCCCCTGCCACACGAAAACTGGGGTGCTCTGGTTGACGAGTGGTGTTGTCATCCCAACCCCTTTGCTAATAAGCCACTTCATCCGCAAGAGAATGACTGTTTCACTGGAGACTGTTTCTTCTTGGTGAATTTAAGACATGATTTACAGCAGCCGAGACCTGAAGTAGCCCCAGTGGAGACGCGCTGTCTTTCTTCTGAGAACCATTTAAAAATGAAACCAAAGGCAAATACCAAAGTAATTTGTAAGCGTTGCAAGGTAATGTTGGGAGAGACTGTGTCATCAGAAACCACTAAGTTTTATATGACAGAGATAATTATTCAGCCATCTGAAAGAAATTTTCCCATCATACCAAGGTCTCAGTTTGTGCAGAGCGTTATTGCCCAGTGCCTGATGGAACTCTCCTCTGCTAGAAGCACTTTTAGATTCACTCTTCAAGGACACGACGGCAAAGTGTACATCTTGCTATGGCTTTTAAACTCAGACAGTTTGGTGATTGAAGCTTTGGAAAGTTCCACAAGTATCAAAAAATTCCCTCTGTTGGAAGACTTATTGAAGGCCGATTCTAGTTCTGCCTGGAATGCTGTCAAGGTCCTCTACCAGCCATGCATCAAAAGCAGGAATGCAGACTGTCAATATCTAGATTTATCTAGTATCCATTGTCTTCACCAAAACAAGAAA

Related Sequences

bmy_21692T0 Protein

Length: 232 aa      View alignments
>bmy_21692T0
KLLRLLPLPHENWGALVDEWCCHPNPFANKPLHPQENDCFTGDCFFLVNLRHDLQQPRPEVAPVETRCLSSENHLKMKPKANTKVICKRCKVMLGETVSSETTKFYMTEIIIQPSERNFPIIPRSQFVQSVIAQCLMELSSARSTFRFTLQGHDGKVYILLWLLNSDSLVIEALESSTSIKKFPLLEDLLKADSSSAWNAVKVLYQPCIKSRNADCQYLDLSSIHCLHQNKK