Part of scaffold_3248 (Scaffold)

For more information consult the page for scaffold_3248 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CNGA3 ENSTTRG00000006044 (Bottlenosed dolphin)

Gene Details

cyclic nucleotide gated channel alpha 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005715, Bottlenosed dolphin)

Protein Percentage 91.59%
cDNA percentage 93.7%
Ka/Ks Ratio 0.23888 (Ka = 0.0445, Ks = 0.1862)

CNGA3 ENSBTAG00000009834 (Cow)

Gene Details

Cyclic nucleotide-gated cation channel alpha-3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000052464, Cow)

Protein Percentage 88.44%
cDNA percentage 88.79%
Ka/Ks Ratio 0.11131 (Ka = 0.0612, Ks = 0.5495)

CNGA3  (Minke Whale)

Gene Details

cyclic nucleotide gated channel alpha 3

External Links

Gene match (Identifier: BACU019102, Minke Whale)

Protein Percentage 88.09%
cDNA percentage 91.94%
Ka/Ks Ratio 0.40807 (Ka = 0.0706, Ks = 0.1731)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1716 bp    Location:111761..91625   Strand:-
>bmy_21711
ATGGAGACCAGAGGACTGGCTGAATCCAAGCGAAGCTCCTTCAGCAGCCAGGGGCCTGCCAGGTTGTCACGCCTTATCTCGCTGCGCGTCTGGGCCGCCAGGCACTTACGCCACGAGGACCAGAGGCCTGACTCTTTCCTGGAGCGTTTCCGCGGAGCCGAGCTCAAGGAGGTGTCCAGCCGCGAAAGCCATGTCCAGTCCAACGCGGGCAGCCAGGGGCCGCCAGACAGAGGGAGAAGAAAGAAGAAGGACACCATCGTGGTGGACCCCTCCAACAACATGTACTATCACTGGCTGACCATCATCGCCGTGCCCATCTTCTACAACTGGTGTCTGCTCGTTTGCAGGGCCTGTTTTGATGAGCTTCAGTCTGAGTACCTGATGCTTTGGCTGGTCTTGGACTACTCAGCCGACTTCCTCTATGGCTTCGATGTGCTGGTCCGAGCCCGGACAGGCTTGATGGTTACGGATGCCAACCGGCTGTGGAGGCACTACACAAAGACCTTGCACTTCAAGCTGGACATGTTGTCCCTGGTCCCCACGGACCTGGCTTATTTTAAGCTGGGCATGAACTACCCAGAACTGAGGTTCAACCGCCTACTGAAGTTGACCCGGCTCTTCAAATTCTTTGACCGCACAGAGACGAGGACCAACTACCCCAACATGTTCAGGATTGGGAACTTGGTCTTGTACATTCTCATCATCATCCACTGGAATGCCTGCATCTACTTTGCCATTTCCAAGTTCATTGGTTTTGGGACCGACTCCTGGGTCTACCCAAACATCTCAAACCCAGAGTATGGGCGCCTCTCCAGGAAGTACATTTACAGTCTCTACTGGTCTACCTTGACCCTGACCGCCATCGGCGAGACCCCACCCCCCGTGAGAGATGAGGAGTATCTTTTTGTGGTCCTCGACTTCCTGGTGGGTGTCCTGATTTTTGCCACCATTGTGGGCAATGTGGGCTCCATGATCTCGCACATGAACGCTTCGCGGGCTGAATTCCAGGCCAAGAGCGACTCCGTCAAGCAGTACATGCAATTCCGCAAGGTGACCAAGGACTTGGAGACACGGGTGTTCCGGTGGTTCGACTACCTGTGGGCCAACAAGAAGACGGTGGATGAGAAGGAGGTGCTCAAGAGCCTCCCCGACAAGCTGAGGGCCGAGATCGCCATCGGTGTGCACCTGGACACTCTGAGGAAGGTCCACATCTTCCAGGACTGCGAGGCGGGGCTGCTGGTGGAGCTGGTGCTAAAGCTGCGGCCTGCGGTGTTCAGCCCCGGGGATTATATCTGCAAGAAGGGGGACATAGGGAGGGAGATGTATATCATCAAGGAGGGCAAGCTGGCTGTGGTGGCCGAGGATGGGATCACCCAGTTCGTGGTCCTCAGCGATGGGAGTTACTTTGGGGAGATCAGCATCTTGAACATCAAGGGGAGCAAGTCGGGGAACCGCAGGACGGCCAACATCAGGAGCATCGGTTACTCGGACCTGTTCTGCCTCTCCAAGGACGATCTGATGGAGGCTCTCACTGAATACCCTGAGGCCAAGAAGGCGCTGGAGGAGAAGGGGCGGCAGATCCTGATGAAGGACAACCTGATCGACGAGGAACTGGCCAAGGCCGGGGCCGGACCCCCAGGACATCGAGGAGAAAGTAGAGCACCTGGAATCCTCCCTGGACACCCTGCAGACCAGGTTTGCACGGCTCCTGGCTGA

Related Sequences

bmy_21711T0 Protein

Length: 572 aa      View alignments
>bmy_21711T0
METRGLAESKRSSFSSQGPARLSRLISLRVWAARHLRHEDQRPDSFLERFRGAELKEVSSRESHVQSNAGSQGPPDRGRRKKKDTIVVDPSNNMYYHWLTIIAVPIFYNWCLLVCRACFDELQSEYLMLWLVLDYSADFLYGFDVLVRARTGLMVTDANRLWRHYTKTLHFKLDMLSLVPTDLAYFKLGMNYPELRFNRLLKLTRLFKFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVYPNISNPEYGRLSRKYIYSLYWSTLTLTAIGETPPPVRDEEYLFVVLDFLVGVLIFATIVGNVGSMISHMNASRAEFQAKSDSVKQYMQFRKVTKDLETRVFRWFDYLWANKKTVDEKEVLKSLPDKLRAEIAIGVHLDTLRKVHIFQDCEAGLLVELVLKLRPAVFSPGDYICKKGDIGREMYIIKEGKLAVVAEDGITQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELAKAGAGPPGHRGESRAPGILPGHPADQVCTAPG*