Sequence detailsbmy_21713 (Coding sequence)

Part of scaffold_3242 (SequenceType object (1))

For more information consult the page for scaffold_3242 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GPATCH1ENSTTRG00000012221 (Bottlenosed dolphin)

Gene Details

G patch domain containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011591, Bottlenosed dolphin)

Protein Percentage 90.17%
cDNA percentage 91.26%
Ka/Ks Ratio 0.4079 (Ka = 0.0202, Ks = 0.0494)

GPATCH1ENSBTAG00000000721 (Cow)

Gene Details

G patch domain-containing protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000963, Cow)

Protein Percentage 92.42%
cDNA percentage 92.46%
Ka/Ks Ratio 0.20473 (Ka = 0.0405, Ks = 0.1978)

GPATCH1 (Minke Whale)

Gene Details

G patch domain containing 1

External Links

Gene match (Identifier: BACU000565, Minke Whale)

Protein Percentage 98.18%
cDNA percentage 98.82%
Ka/Ks Ratio 0.41489 (Ka = 0.0082, Ks = 0.0197)

Additional orthologs identified in other species via the OPTIC pipeline.

GPATCH1 (Human)   Gpatch1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2769 bp    Location:68941..25383   Strand:-
Raw sequence 
>bmy_21713
ATGGCGGCGCTGGATAGAGACAGTGACGAGGATTTGGTCAGCTATGGGACGGGCCTGGAGCTGCTGGAAGAAGGCGAGAGACCAAAGAAACCAATTCCTCTTCAGGATCAGACTGTCAGAGACGAAAAAGGAAGGTATAAACGATTTCATGGAGCCTTCAGTGGAGGTTTCTCTGCTGGTTACTTCAACACCGTTGGCTCAAAAGAAGGATGGACACCCTCTTCCTTTGTGTCTTCACGACAGAACAGAGCAGACAAATCTGTTTTTGGTCCCGAAGATTTTATGGATGAAGAGGATCTTAGTGAATTTGGGATAGCACCTAAAGCGATTGTTACCACAGATGATTTTGCTTCTAAAACCAAAGATCGAATACGAGAAAAGGCCAGGCAGTTAGCAGCGGCTACTGCCCCTATTCCTGGCGCCACTTTGCTTGATGACCTCATAACACCAGCGAAGTTATCTGTTGGTTTTGAATTGCTAAGAAAAATGGGTTGGAAGGAAGGACAAGGAATTGGTCCTCGAGATGAAGATGATGACTACTTGCCAGAAAATGTGACCTTTGCACCCAAAGATGTCACACCTGTGGATTTCACGCCTAAAGATAATGTACATGGACTGGCTTACAAGGGCCTGGATCCCCACCAAGCACTGTTTGGAACTTCAGGAGAACATGTTAATCTTTTTAGTGGTGGACCCGAGGGCGCCAACAATCTTCTTGGAGATGTTGGAGTGAATAAAGGAAGAAAATTGGGAATTTCAGGCCAGGCTTTTGGTGTAGGTGCCCTGGAAGAGGAAGACGATGATATCTACGCCACGGAAACTCTATCCAAGTATGATACCATTTTGAAGGATGAGGAGCCTGGAGACGGACTCTATGGCTGGACAGCACCCAGGCAATATAAAAATCAGAAAGAATCAGAGAAAGAGCTTCGCTACGTTGGCAAAATTTTGGATGGATTTTCCTTGGCTTCTAAACCTTTATCTTCTAAGAAAATTTATCCACCACCCGAATTGCCAAGAGACTATCGACCAGTGCATTATTTCAGACCTGTTGTGGCTGCAACCTCAGAGAACTCCCACTTACTTCAGGTATTATCAGAGTCAGCTGGAAAGCCAACACATGACCCAGGGACGTATAGTAGGCACCAACTGAATGCCTCCAAGCGGGGAGAGTTGCTAGGAGAAACGCCTATTCAAGGGGCACCTACTTCAGTGTTAGAATTTCTGTCCGAAAAAGATAAAGAGAGACTCAAAGAAATGAAGCAGGCAACTGACCTTAAAGCAGCTCAACTCAAGGCCAGGAGTCTGGCCCAGAATGCCTCTAGCAGCAGACCCCAGCCCTCCTCTCCAGACGTCGGACACTGCTCTTGGCACATGGCATTGAGTGGTGGCACAGCCCCCGTAAGAGCCAGCAACTTCAAACCTTTCGCAAAAGAGCCAGAAAAGCAAAAACGATATGAAGAGTTTTTAGTAAATGTGAAACGGGGTCAGAAAGATGCTCTGGAATGTTGTCTTGATCCCAGTATGACAGAGTGGGAGCGACGCCGTGAGAGGGATGAGTTTGCTCAGGCAGCCCTGCTGTATGTGTCTTCCCATTCGACCTTGTCCTCCCGGTTCACTCATGCCAAGATAGAAGACGATTCAGATCAGGTGGAAGTCCCTCGGGACCAAGAGAATGACGTCAGTGACAAGCAGTCAGCTGTGAAGATGAAGCTGTTTGGGAAGCTTACCCGAGACACATTTGAGTGGCACCCTGACAAGCTTCTGTGTAAGAGGTTTAATGTCCCTGACCCATATCCAAGTTCAACTTTAGTTGGCTTACCAAGAGTGAAACGTGACAAATACTCAGTCTTCAACTTTCTGACAGTCCCAGAGACAGCTTCCTCACCTGCAACTCAAGCATCAAGTGAAAAAGTTCCGCAGCACCGGGGTCCCGACAAATCAAGAAAACCATCCAGATGGGATACATCTAAACAAGAAAAGAAAGAAGATTCCATTAGTGAATTTTTAAGTCTGGCTAGATCAAAAGTTGGTCCACCTAAACAAGAGTCCAGTCCATTAGTAAACAAAGAGGAAGAGCATACAATGGAATCAGTCTCAAATAAGGTAAACAAAGGTGTGGATTCACAGACTGAAGGAGAGGGTAGCCGCCCATCCATGGACTTATTCAAAGCCATCTTTGCCAGCTCCTCAGATGAAAAGTCTTCATCCTCTGAGGATGAGCAGGGCGACAGTGAGGATGATGAGGAGGGTACCCGGGAAGCCGACGTCAAAGCTAGCGAGCCAGCACCCCAGGAGCCCGCACCCTTCTTCCCGATTCAGAAGATACAGATAGATGAAAGAGAGGAGTTCGGCCCGCAGCTGCCTCCCGTCTTCTGCGCCAATGCTCGTCAGAAACTTGAGGCACCTCTCAAAGAGAAACATAAAAAGAACAAAGAAAAACACAAGACCAAGAAAGAGCACAGACGGAAGAAAGAGAAGAAAAAGAAACACCRGAAGCACAAACACAAAGGCAAGCAAAAGAATAAAAAGCCAGAGAAAAGTAGTAGTTCCGAGAGTACGGACAGCAGTGACAGCCAGAGTGATGAAGAGGGGGCCACAGACCTGTCACCCCAGGAGCTGCTGAGACGGCTGAAGCGTCTTCCACTAAGGAGGCACTTGCCTTGGAAGTGTCAGAGGAAAAAACTCAGACTGTACAGTTTAATTAAAATGGCATTTTTCTATTTTTTTCTTGATTTTTCATTTCCTGAAACTTTTAAAAAGAAATGA

Related Sequences

bmy_21713T0 SequenceType object (3)

Length: 923 aa      View alignments
>bmy_21713T0
MAALDRDSDEDLVSYGTGLELLEEGERPKKPIPLQDQTVRDEKGRYKRFHGAFSGGFSAGYFNTVGSKEGWTPSSFVSSRQNRADKSVFGPEDFMDEEDLSEFGIAPKAIVTTDDFASKTKDRIREKARQLAAATAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQGIGPRDEDDDYLPENVTFAPKDVTPVDFTPKDNVHGLAYKGLDPHQALFGTSGEHVNLFSGGPEGANNLLGDVGVNKGRKLGISGQAFGVGALEEEDDDIYATETLSKYDTILKDEEPGDGLYGWTAPRQYKNQKESEKELRYVGKILDGFSLASKPLSSKKIYPPPELPRDYRPVHYFRPVVAATSENSHLLQVLSESAGKPTHDPGTYSRHQLNASKRGELLGETPIQGAPTSVLEFLSEKDKERLKEMKQATDLKAAQLKARSLAQNASSSRPQPSSPDVGHCSWHMALSGGTAPVRASNFKPFAKEPEKQKRYEEFLVNVKRGQKDALECCLDPSMTEWERRRERDEFAQAALLYVSSHSTLSSRFTHAKIEDDSDQVEVPRDQENDVSDKQSAVKMKLFGKLTRDTFEWHPDKLLCKRFNVPDPYPSSTLVGLPRVKRDKYSVFNFLTVPETASSPATQASSEKVPQHRGPDKSRKPSRWDTSKQEKKEDSISEFLSLARSKVGPPKQESSPLVNKEEEHTMESVSNKVNKGVDSQTEGEGSRPSMDLFKAIFASSSDEKSSSSEDEQGDSEDDEEGTREADVKASEPAPQEPAPFFPIQKIQIDEREEFGPQLPPVFCANARQKLEAPLKEKHKKNKEKHKTKKEHRRKKEKKKKHXKHKHKGKQKNKKPEKSSSSESTDSSDSQSDEEGATDLSPQELLRRLKRLPLRRHLPWKCQRKKLRLYSLIKMAFFYFFLDFSFPETFKKK*