Part of scaffold_3254 (Scaffold)

For more information consult the page for scaffold_3254 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNRPA1 ENSTTRG00000004601 (Bottlenosed dolphin)

Gene Details

small nuclear ribonucleoprotein polypeptide A'

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004334, Bottlenosed dolphin)

Protein Percentage 90.14%
cDNA percentage 89.67%
Ka/Ks Ratio 0.13961 (Ka = 0.0072, Ks = 0.0516)

SNRPA1 ENSBTAG00000013593 (Cow)

Gene Details

U2 small nuclear ribonucleoprotein A'

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018076, Cow)

Protein Percentage 99.06%
cDNA percentage 95.77%
Ka/Ks Ratio 0.02301 (Ka = 0.0042, Ks = 0.1816)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 642 bp    Location:28734..15680   Strand:-
>bmy_21723
ATGGTGAAACTGACGGCGGAGCTAATAGAGCAGGCGGCGCAGTACACCAACGCTGTGCGGGACCGCGAGCTGGACCTGCGGGGGTATAAAATTCCTGTCATTGAAAATCTAGGCGCTACCTTAGACCAGTTTGATGCCATTGATTTTTCTGACAATGAAATCAGGAAACTGGATGGTTTTCCTTTGTTGAGAAGACTGAAAACATTATTAGTGAACAACAACAGAATATGTATTCTAAGAAATCCTGTAACAAATAAGAAGCATTACAGACTATATGTGATTTATAAAGTTCCACAAGTCAGAGTACTGGATTTCCAGAAGGTGAAACTAAAAGAGCGTCAGGAAGCAGAGAAAATGTTCAAGGGCAAACGGGGTGCACAACTTGCAAAGGATATTGCCAGGAGAAGCAAAACTTTCAATCCAGGTGCTGGTTTGCCAACTGACAAAAAGAAAGGCGGGCCATCCCCAGGGGATGTGGAAGCAATCAAGAATGCTATAGCAAACGCGTCAACTTTGGCTGAAGTGGAGCGGCTGAAGGGCTTGCTTCAGTCCGGTCAGATACCTGGCAGAGAACGCAGATCAGGCCCCACTGATGATGGTGAAGAGGAGATGGAAGAAGACACAGTCACAAATGGGTCCTGA

Related Sequences

bmy_21723T0 Protein

Length: 214 aa      View alignments
>bmy_21723T0
MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGPTDDGEEEMEEDTVTNGS*