Sequence details bmy_21726 (Coding sequence)

Part of scaffold_3239 (Scaffold)

For more information consult the page for scaffold_3239 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCLO  (Minke Whale)

Gene Details

piccolo presynaptic cytomatrix protein

External Links

Gene match (Identifier: BACU017631, Minke Whale)

Protein Percentage 18.52%
cDNA percentage 37.28%
Ka/Ks Ratio 0.15953 (Ka = 1.3654, Ks = 8.5585)

Additional orthologs identified in other species via the OPTIC pipeline.

PCLO (Cow)   PCLO (Human)   Pclo (Mouse)  

Genome Location

Sequence Coding sequence

Length: 612 bp    Location:120907..149347   Strand:+
Raw sequence 
>bmy_21726
ATGGAAGCCAATAGCATGCAAGTATTGGAATGGAATGGAATTCCTTTAACTTCTAAAACATACGAAGAAGTGCAGAGTATCATTAGTCAGCAAAGTGGGGAAGCAGAAATATGTGTAAGACTGGACCTCAGTATGCTATCAGATTCTGAAAATCCCCAGCACCTAGAACTTCATGAACCACCAAAAGCTGTGGATAAAGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCTGCAGAGCTCCAGAAGGTCTCGCTACAGCAGTCACCACTGGTTCTGTCGTCCGTCGTTGAAAAAGGATCTCACGTTCATTCAGGTCCTACATCAGCAGGATCCAGTTCTGTTCCCAGCCCTGGGCAACCAGGGTCACCCTCAGTGAGCAAAAAGAAACACAGCAGCAGCAAGCCTACTGATGCAACAAAGGTTGTCTCTCATCCAATTACGGGGGAAATTCAGCTTCAAATCAACTATGATCTTGGAAATCTCATAATACATATTCTCCAAGCAAGAAACCTTGTCCCTCGAGACAACAATGGTTACTCAGACCCCTTTGTTAAAGTGTACCTTCTTCCAGGGCGAGGGTTGACTATGAAGTCATCGGTCAAGTGCTGA

Related Sequences

bmy_21726T0 Protein

Length: 204 aa      
>bmy_21726T0
MEANSMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLDLSMLSDSENPQHLELHEPPKAVDKAKSPGVDPKQLAAELQKVSLQQSPLVLSSVVEKGSHVHSGPTSAGSSSVPSPGQPGSPSVSKKKHSSSKPTDATKVVSHPITGEIQLQINYDLGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGLTMKSSVKC*