Part of scaffold_3326 (Scaffold)

For more information consult the page for scaffold_3326 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LDOC1L ENSTTRG00000012444 (Bottlenosed dolphin)

Gene Details

leucine zipper, down-regulated in cancer 1-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011791, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.88%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0454)

LDOC1L ENSBTAG00000012425 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040227, Cow)

Protein Percentage 96.23%
cDNA percentage 93.17%
Ka/Ks Ratio 0.05861 (Ka = 0.0169, Ks = 0.2886)

LDOC1L  (Minke Whale)

Gene Details

leucine zipper, down-regulated in cancer 1-like

External Links

Gene match (Identifier: BACU019943, Minke Whale)

Protein Percentage 99.58%
cDNA percentage 99.44%
Ka/Ks Ratio 0.15233 (Ka = 0.0018, Ks = 0.0121)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 720 bp    Location:73108..72389   Strand:-
>bmy_21765
ATGGTTCAACCCCAGACCGCAAAAGCTGAAACCCCAGCCTCTGCAGCTTCTACCAATGCCCAAATGGATGACGTCATCGACACCCTGACCTCCCTGCGCCTCACTAACTCCGCGCTGAGGCGGGAGGCCTCGACSCTGCGGGCAGAGAAGGCCAACCTCACCAACATGCTGGAGAGCGTGATGGCGGAGCTGACCTTGTTACGCACCCGGGCTCGGATTCCCGGGGCGCTGCAGATCACCCCACCCATCTCGGCCATTACCTCCAATGGGACCCGGCCGATGACAACGCCTCCAACCTCTCTGCCCGAGCCCTTTTCCGGAGACCCTGGCCAGCTGGCGGGGTTCTTGATGCAGATGGACAGATTCATGATCTTCCAGGCCTCGCGCTTCCCCGGAGAGGCCGAGCGAGTGGCGTTCCTCGTGTCCCGGCTGACCGGGGAGGCGGAGAAGTGGGCGATCCCCCACATGCAACCCGACAGCCCCTTGCGAAACAACTATCAGGGATTCCTGGCCGAGTTGCGGAGAACCTACAAGTCTCCGCTGCGGCACGCCCGGCGCGCCCAGATCAGGAAGACTTCGGCCTCGAATCGAGCCGTGCGGGAACGGCAGTCGCTCTGCCGCCAGCTGGCCGCCACGGGCACGGTGCCCTGCCCTGTGCACCCAGCCTCCAACGGGACCAGTCCAGCCCCGGCCCTGCCCACCAGAGCTCGGAACCTTTAG

Related Sequences

bmy_21765T0 Protein

Length: 240 aa      View alignments
>bmy_21765T0
MVQPQTAKAETPASAASTNAQMDDVIDTLTSLRLTNSALRREASTLRAEKANLTNMLESVMAELTLLRTRARIPGALQITPPISAITSNGTRPMTTPPTSLPEPFSGDPGQLAGFLMQMDRFMIFQASRFPGEAERVAFLVSRLTGEAEKWAIPHMQPDSPLRNNYQGFLAELRRTYKSPLRHARRAQIRKTSASNRAVRERQSLCRQLAATGTVPCPVHPASNGTSPAPALPTRARNL*