Part of scaffold_3257 (Scaffold)

For more information consult the page for scaffold_3257 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCN9A ENSTTRG00000003797 (Bottlenosed dolphin)

Gene Details

sodium channel, voltage-gated, type IX, alpha subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003584, Bottlenosed dolphin)

Protein Percentage 96.88%
cDNA percentage 97.48%
Ka/Ks Ratio 0.35282 (Ka = 0.0181, Ks = 0.0514)

BT.61065 ENSBTAG00000002425 (Cow)

Gene Details

sodium channel protein type 9 subunit alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003146, Cow)

Protein Percentage 94.99%
cDNA percentage 93.72%
Ka/Ks Ratio 0.13836 (Ka = 0.0276, Ks = 0.1998)

SCN9A  (Minke Whale)

Gene Details

sodium channel, voltage-gated, type IX, alpha subunit

External Links

Gene match (Identifier: BACU010093, Minke Whale)

Protein Percentage 88.02%
cDNA percentage 90.2%
Ka/Ks Ratio 0.679 (Ka = 0.0967, Ks = 0.1424)

Genome Location

Sequence Coding sequence

Length: 3096 bp    Location:97408..63811   Strand:-
>bmy_21768
ATGCTTATCATGTGCACTATTCTGACGAATTGCATATTTATGACCATGAGTAACCCTCCAGATTGGACCAAGAATGTAGAGTACACTTTTACTGGAATATATACTTTTGAATCACTTGTAAAAATCCTTGCAAGAGGCTTCTGTGTAGGAGAATTCACTTTCCTTCGTGACCCTTGGAACTGGCTTGATTTTATTGTCATTGTTTTTGCGTATTTAACAGAATTTGTAAACCTAGGCAATGTTTCAGCTCTTCGAACTTTCAGAGTGTTGAGAGCTTTGAAAACTATTTCTGTAATCCCAGGTAAGAAATATGTGACAGAGTTTGTGGACCTGGGCAATGTCTCAGCGTTGAGAACATTCAGAGTTCTCCGAGCTTTGAAAACAATTTCAGTCATTCCAGGCCTGAAGACCATCGTAGGGGCCCTGATCCAGTCTGTGAAGAAGCTTTCTGACGTCATGATCCTGACTGTGTTCTGTCTGAGCGTGTTTGCACTGATTGGGCTGCAGCTCTTTATGGGCAACCTGAAGCAAAAATGTGTGCGGACTCCACTTGAAAATAATGAAACGATAGAAAGCATATTGAATACTCTCGATGAAGAAGACTATGGAAAATATTTTTATTACTTGGAGGGATCCAAAGATGCTCTCCTTTGTGGTTTCAGCACCGATTCAGGTCAGTGTCCAGAAGGGTACACCTGTGTGAAGGTTGGCAGGAACCCTGATTATGGCTACACGAGCTTCGATACTTTCAGTTGGGCCTTCTTAGCCTTGTTTCGGCTAATGACCCAGGATTACTGGGAAAACCTTTACCAACAGACACTGCGTGCTGCTGGGAAAACCTACATGATCTTCTTTGTTGTGGTGATTTTCCTGGGATCATTTTATCTAATAAACTTGATCCTGGCTGTGGTTGCCATGGCCTATGAAGAACAGAACCAGGCAAACATCGAAGAAGCTAGGCAGAAAGAGTTAGAATTTCAACAGATGTTAGATCGACTTAAAAAAGAGCAAGAGGAAGCTGAGGCAATAGCAATGGCAGCAGCTGAATATACAAGCATTGAGAGAAGCCGAATAATGGGCCTCTCCGAGAGTTCTTCCGAAACATCCAAACTGAGCTCTAAAAGTGCTAAAGAAAGAAGAAACAGAAGAAAGAAAAAGAATCAAAAGAAACTCTCCATTGGGGAAGAAAAGGGAGATGATGAGAAATTGTCCAAATCGGAATCCGAGGAGAGCATCAGGAGAAARAGTTTCCACCTTGGTGTTGAAGGTCATAGGCGAGCCCGTGAAAAGAGATTGTCTACCCCTAACCAGTCACCACTCAGCATTCATGGCTCCTTGTTTTCTGCAAGGCGAAGCAGCAGAACAAGTCTTTTTAGTTTCAAAGGTCGAAAAGATATTGGATCTGAGACTGAATTTGCTGACGATGAGCATAGCATCTTCGGGGACAACGAGAGCAGAAGAGGCTCACTGTTCGTGCCCCACAGACCTCGGGAGCGGCGCAGCAGTAATATCAGCCAAGCCAGTAGGTCCCCCCCCGTGCTGCCGGTGAACAGGAAGATGCACAGCGCCGTGGACTGCAATGGTGTGGTCTCCTTGGTGGATGGACCCTCAGCCCTCATGTTCCCCAATGGACAGCTTCTGCCAGAGGTGATAATAGATAAGGCAACTTCTGAGGACAGTGGTACAAACAATCAAATACACAAGAAAAGACGTTCCAGTTCTTACCTCCTTTCTGAGGATATGTTGAATGATCCCAATCTCAGACAAAGGGCAATGAGTAGGGCAAGCATATTAACAAACACTGTAGAAGAACTCGAGGAGTCCAGACAAAAATGTCCACCTTGGTGGTACAGATTTGCACACACATTCTTGATCTGGAATTGCTCTCCATATTGGATAAAATTCAAAAAACTTATCTATTTTATTGTAATGGATCCTTTTGTAGATCTTGCTATTACCATTTGCATAGTTTTAAACACACTGTTTATGGCTATGGAACATCACCCAATGACTGATGAATTCAAGAACGTGCTCACTGTGGGAAATTTGGTCTTTACTGGCATCTTTGCAGCTGAAATGGTTTTAAAACTAATTGCCATGGATCCATATGAGTACTTCCAAGTAGGATGGAATATTTTTGACAGTCTTATTGTGACTTTAAGCTTAGTGGAGCTTTTTCTAGCAGATGTGGAAGGATTGTCAGTTCTACGATCATTCAGACTGCTCCGAGTTTTCAAGTTGGCAAAATCTTGGCCAACACTGAACATGCTGATCAAGATCATTGGTAACTCAGTGGGGGCTCTGGGTAACCTCACCTTGGTGTTGGCCATCATCGTCTTCATTTTTGCCGTGGTCGGCATGCAGCTCTTTGGTAAGAGCTACAAAGAATGTGTCTGTAAGATCAATGAAGACTGCACACTCCCACGCTGGCACATGAATGACTTCTTCCACTCCTTCCTGATTGTGTTCCGAGTGCTGTGTGGAGAGTGGATAGAGACCATGTGGGACTGCATGGAGGTCGCCGGTCAAGCCATGTGCCTTATTGTTTACATGATGGTCATGGTCATTGGAAACCTGGTGGTCCTCAACCTATTTCTTGCTTTATTATTGAGCTCATTTAGTTCAGACAATCTTACAGCAATTGAAGAAGACACTGATGCAAACAACCTCCAGACTGCAGTGGCTAGAATTAAGAAGGGAATAAATTATGTGAAACAAACCTTACGTGAATTTATTCTAAAAGCATTTTCCACAAAGCCAAAGATTTCCAGAGAGATAAGCCGAACAGAAGATCTAAATTTTAAGAAGGAAAACTACATCTCTAACCACACACTTGCTGAAATGAGCAAGGATCACAATTTTCACAAAGAAAAAGATAAAACCAGTGGTTTTGGAAACAGCATGGACAAATACTTGGTGGAAGAAAGTGATTGTCAATCATTTATTCATAATCCCAGCCTCACAGTGACAGTGCCAATTGCACCTGGGGAATCTGATTTGGAAATTATGAATACTGAGGAACTTAGCAGTGATTCAGATAGTGAATACAGCAAAGGGGTAAGATTGTTTTATACACATTTTGTTTCATGTTATTAA

Related Sequences

bmy_21768T0 Protein

Length: 1032 aa      View alignments
>bmy_21768T0
MLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFIVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGKKYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLKQKCVRTPLENNETIESILNTLDEEDYGKYFYYLEGSKDALLCGFSTDSGQCPEGYTCVKVGRNPDYGYTSFDTFSWAFLALFRLMTQDYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEARQKELEFQQMLDRLKKEQEEAEAIAMAAAEYTSIERSRIMGLSESSSETSKLSSKSAKERRNRRKKKNQKKLSIGEEKGDDEKLSKSESEESIRRKSFHLGVEGHRRAREKRLSTPNQSPLSIHGSLFSARRSSRTSLFSFKGRKDIGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSSNISQASRSPPVLPVNRKMHSAVDCNGVVSLVDGPSALMFPNGQLLPEVIIDKATSEDSGTNNQIHKKRRSSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHTFLIWNCSPYWIKFKKLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLTVGNLVFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINEDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLNLFLALLLSSFSSDNLTAIEEDTDANNLQTAVARIKKGINYVKQTLREFILKAFSTKPKISREISRTEDLNFKKENYISNHTLAEMSKDHNFHKEKDKTSGFGNSMDKYLVEESDCQSFIHNPSLTVTVPIAPGESDLEIMNTEELSSDSDSEYSKGVRLFYTHFVSCY*