Part of scaffold_3278 (Scaffold)

For more information consult the page for scaffold_3278 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATP6AP1 ENSTTRG00000011434 (Bottlenosed dolphin)

Gene Details

ATPase, H+ transporting, lysosomal accessory protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010845, Bottlenosed dolphin)

Protein Percentage 97.86%
cDNA percentage 97.86%
Ka/Ks Ratio 0.12032 (Ka = 0.0092, Ks = 0.0761)

ATP6AP1 ENSBTAG00000012117 (Cow)

Gene Details

V-type proton ATPase subunit S1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016073, Cow)

Protein Percentage 87.58%
cDNA percentage 89.29%
Ka/Ks Ratio 0.15864 (Ka = 0.0639, Ks = 0.4031)

ATP6AP1  (Minke Whale)

Gene Details

ATPase, H+ transporting, lysosomal accessory protein 1

External Links

Gene match (Identifier: BACU011438, Minke Whale)

Protein Percentage 98.21%
cDNA percentage 98.21%
Ka/Ks Ratio 0.12997 (Ka = 0.0079, Ks = 0.0605)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1407 bp    Location:118167..110802   Strand:-
>bmy_21787
ATGATGGCGGCGACCGCGGTGGATCGAATGCGGGCGGGGATGCGGCGGGCCCCGGCGCTCTGGCAGATGCCATGGCTGCCGCTGGTGATGGTGGCGGCGGCGGCGGTGGCGTCGGAGCAGCAGGTGCCGCTGGTGCTGTGGTCGAGTGACCGAGACCTCTGGGCTCCTGCGGCCGACACCCACGAGGGCCATATCACCAGCGACATGCAGCTCTCTACCTACTTAGACCCCGCCCTGGAGCTGGGCCCCCGCAACGTGCTGCTTTTCCTTCAGGACAAGCTGAGCATCGAGGACTTCACAGCGTATGGTGGCGTGTTTGGAAACAAGCAGGACAGTGCCTTCTCTAACCTGGAGAATGCCCTGGACCTGGCCCCCTCCTCTCTGGTGCTTCCGGCCGTCGACTGGTACGCGGTCAGCACTCTGACCACTTACCTGCAGGAGAAGCTCGGGGCCAGCCCCCTGCACGTGGACCTGGCCACGCTTCGGGAGCTGAAGCTCAACGCCAGCCTCCCGGCCTTGCTGCTCCTCCGCCTGCCCTACACGGCCAGCTCGGGTCTGATGGCGCCGAAGGAAGTGCTCACAGGCAATGATGAGGTCATCGGGCAGGTGCTGAGCATGCTCAAGTCGGAAGACGTTCCGTACACGGCGGCCCTCACGGCAGTCCGCCCTCCTAGGGTGGCCCGCGATGTAGCCTTGGTGGCCGGGGGTCTGGGTCGCCAGCTGCTGCAAAGACAGTCGGCATCGCCTATGGTCTTTTCCCCTGTGAGTTACAATGACACTGCCCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCGGTGGCATATAGGGACCACTGGAAGGACCTGACCTCCCTCACCTTTGGGGATCAGGACCGCCTCAACCTGACCGGCTCCTTCTGGAACGACTCCGTTGCCAGGCTTGTGCTGACCTACGAACAGCTCTTCGGTACCACAGTGACATTCAGGTTCATTCTGGCTAACCGCTTCTACCCGGTGTCCGCCCGACACTGGTTTACCCTGGAGCGCCTTGAAATCCACAGCAACGGCTCCGTCGCCTACTTCAATGCCTCCCAGGTCACGGGGCCCAGCATCTATTCCTTCCACTGCGAGTACGTCAGCAGTCTGAACAAGAATGGTAATCTCCTCGTGCCCGGCACACAGCCCTCTCTCTGGCAGATGACTTTTCAGGACTTCCAGATCCAGGCCTTCAACGTGACGGGTGAGCAGTTCTCCTACGCCAGTGACTGTGCAGGCTTCTTCTCCCCGGGCATCTGGATGGGGCTGCTCACCTCCCTGTTCATGCTCTTCATCTTCACCTACGGCCTGCACATGATCCTCAGCCTCAAGACCATGGACCGCTTTGACGACCACAAGGGCCCCACCATAGCTTTGACCCAGATCGTGTGA

Related Sequences

bmy_21787T0 Protein

Length: 469 aa      View alignments
>bmy_21787T0
MMAATAVDRMRAGMRRAPALWQMPWLPLVMVAAAAVASEQQVPLVLWSSDRDLWAPAADTHEGHITSDMQLSTYLDPALELGPRNVLLFLQDKLSIEDFTAYGGVFGNKQDSAFSNLENALDLAPSSLVLPAVDWYAVSTLTTYLQEKLGASPLHVDLATLRELKLNASLPALLLLRLPYTASSGLMAPKEVLTGNDEVIGQVLSMLKSEDVPYTAALTAVRPPRVARDVALVAGGLGRQLLQRQSASPMVFSPVSYNDTAPRILFWAQNFSVAYRDHWKDLTSLTFGDQDRLNLTGSFWNDSVARLVLTYEQLFGTTVTFRFILANRFYPVSARHWFTLERLEIHSNGSVAYFNASQVTGPSIYSFHCEYVSSLNKNGNLLVPGTQPSLWQMTFQDFQIQAFNVTGEQFSYASDCAGFFSPGIWMGLLTSLFMLFIFTYGLHMILSLKTMDRFDDHKGPTIALTQIV*