Part of scaffold_3290 (Scaffold)

For more information consult the page for scaffold_3290 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBX18 ENSTTRG00000005713 (Bottlenosed dolphin)

Gene Details

T-box 18

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005395, Bottlenosed dolphin)

Protein Percentage 98.96%
cDNA percentage 98.39%
Ka/Ks Ratio 0.09539 (Ka = 0.0048, Ks = 0.0502)

TBX18 ENSBTAG00000018161 (Cow)

Gene Details

T-box transcription factor TBX18

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024171, Cow)

Protein Percentage 98.1%
cDNA percentage 95.1%
Ka/Ks Ratio 0.05206 (Ka = 0.0096, Ks = 0.184)

TBX18  (Minke Whale)

Gene Details

T-box 18

External Links

Gene match (Identifier: BACU016906, Minke Whale)

Protein Percentage 99.47%
cDNA percentage 99.12%
Ka/Ks Ratio 0.08313 (Ka = 0.0024, Ks = 0.0286)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1737 bp    Location:79144..108044   Strand:+
>bmy_21797
ATGGCCGAGAAGCGGAGGGGCTCGCCGTGCAGCATGCTAAGCCTTAAGGCGCACGCCTTCTCCGTGGAGGCACTGATCGGCGCCGAGAAGCAGCAACAGCTTCAGAAGAAGAGGCGAAAGCTGGGCGCGGAGGAGGCGGCCGGGGCCTTAGATGACGGAGGCTGCAGCCGCGGCGGCGGCGCTGGAGAAAAGGGCTCCTCTGAGGGAGACGAAGGCACTGCGCTCCCGCCGCCGGCTGGGGCGGCATCCGGGCCCATCCGGAGCTGCGCAGACCTGGAGCGGAGCTGCGGCTCCCGCGGAGCCGCGGGAGGCTGTGAGGACGGCTTCCTGCAGGGCGCTTCCCCACTGGCATCCCCAGGAGACTCCCCGAAGGGGTCCCCGGTGCCCGCCCTGGCCCGGCCCGGGACCCCGCTGCCGTCGCCGCAGGCCCCGCGGGTGGATCTGCAGGGAGCTGAGCTCTGGAAGCGCTTTCACGAGATCGGCACGGAGATGATCATCACCAAGGCCGGCAGGCGCATGTTTCCAGCAATGAGAGTGAAGATATCAGGATTAGATCCTCACCAGCAATATTACATTGCCATGGATATTGTGCCAGTGGACAACAAAAGATACAGGTATGTTTACCACAGCTCTAAATGGATGGTGGCGGGCAACGCTGATTCCCCTGTGCCACCCCGGGTGTACATTCATCCGGACTCGCCTGCCTCAGGGGAGACTTGGATGAGACAAGTGATCAGTTTCGACAAGCTGAAGCTCACCAACAACGAACTGGATGACCAAGGCCACATTATTCTTCATTCTATGCACAAATACCAACCACGAGTCCATGTCATCCGTAAAGACTGTGGGGATGATCTTTCTCCCATCAAGCCTGTTCCATCTGGGGAGGGAGTGAAGGCATTCTCCTTTCCAGAAACTGTTTTCACCACTGTCACCGCCTATCAGAATCAGCAGATTACTCGCCTGAAGATAGATAGGAATCCCTTTGCCAAAGGCTTCCGAGACTCTGGGCGAAATACAGGTTCCTCCACCTTACTCCAAGGTTCTGGGAATGGCGTTGCGGCCACCCACCCTCATCTTCTGTCCGGCTCCCCTTGCTCGTCTCCAGCCTTCCATCTGGGACCCAACACCAGCCAGCTGTGTAGTCTGGCCCCGGCTGACTACTCCGCGTGCGCCCGCTCCAGCCTAACCCTCAACCGGTACAGCACGTCCTTGGCCGAGACCTACAACAGGCTGACCAATCAGACGGGCGAGACCTTCGCCCCGCCCAGGACTCCCTCCTACGTGGGTGTGAGCGGCAGCGCCTCGGTGAACATGTCCATGGGCGGCACGGATGGGGACACCTTCAGCTGCCCACAGACCAGCTTATCCATGCAGATTTCTGGGATGTCCCCCCAGCTCCAGTACATCATGCCTTCACCCCCCAGCAACGCCTTTGCTGCTAACCAGACACACCAGGGTTCCTACAACACGTTCAGGTTACACAGCCCCTGTGCCTTGTATGGATATAACTTCTCCACATCCCCCAAACTGGCTGCCAGTCCTGAGAAAATTGTTTCTTCCCAAGGAAGTTTCTTGGGGTCCTCACCGAGTGGGACCATGACGGATCGGCAGATGTTGCCCCCCGTGGAAGGAGTGCACCTGCTTAGCAGTGGGGGTCAGCAGAGTTTCTTTGATTCTAGGACCCTAGGAAGCTTAACTCTCTCATCATCTCAAGTGTCTGCACATATGGTCTGA

Related Sequences

bmy_21797T0 Protein

Length: 579 aa      View alignments
>bmy_21797T0
MAEKRRGSPCSMLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAAGALDDGGCSRGGGAGEKGSSEGDEGTALPPPAGAASGPIRSCADLERSCGSRGAAGGCEDGFLQGASPLASPGDSPKGSPVPALARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVISFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNTGSSTLLQGSGNGVAATHPHLLSGSPCSSPAFHLGPNTSQLCSLAPADYSACARSSLTLNRYSTSLAETYNRLTNQTGETFAPPRTPSYVGVSGSASVNMSMGGTDGDTFSCPQTSLSMQISGMSPQLQYIMPSPPSNAFAANQTHQGSYNTFRLHSPCALYGYNFSTSPKLAASPEKIVSSQGSFLGSSPSGTMTDRQMLPPVEGVHLLSSGGQQSFFDSRTLGSLTLSSSQVSAHMV*