Part of scaffold_3272 (Scaffold)

For more information consult the page for scaffold_3272 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC38A5 ENSBTAG00000011854 (Cow)

Gene Details

Sodium-coupled neutral amino acid transporter 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015740, Cow)

Protein Percentage 87.61%
cDNA percentage 88.53%
Ka/Ks Ratio 0.34125 (Ka = 0.0885, Ks = 0.2595)

SLC38A5  (Minke Whale)

Gene Details

solute carrier family 38, member 5

External Links

Gene match (Identifier: BACU008472, Minke Whale)

Protein Percentage 90.14%
cDNA percentage 92.05%
Ka/Ks Ratio 0.52784 (Ka = 0.0711, Ks = 0.1347)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1311 bp    Location:50878..43252   Strand:-
>bmy_21803
ATGTGTGCCCGGGCCTTGCCCCTTACCCGCAGTTCGAGGGGAAGACATCGTTTGGAATGTCAGTGTTCAACCTCAGCAACGCCATCATGGGCAGCGGCATCCTGGGGCTGGCCTATGCCATGGCCCACACAGGGGTCCTCTTCTTCTTGTGAGGCCCTGCTGCTCTGCATCGCTCTTCTGTCTTCGTACTCCATCCATCTCCTGCTGACCTGTGCTGGTGTTGTAGGCATCCGAGCCTATGAACAGCTGGGACAGAGGGCGCTGGGGCCTGTGGGGAAGGTAGTGGTGGCCGCGGTCATCTGTCTGCACAATGTTGGGGCCATGTCCAGTTACCTGTTCATCATCAAATCCGAACTCCCCCTGGTTATCGGCACTTTCCTGGACATGGACCCTGAGGGGGACTGGTTCTTGAAGGGAAACCTCCTCATCATCATTGTCAGTGTGTTAATCATCCTGCCACTGGCCCTCATGAGACACTTGGGCTACCTGGGGTATACCAGTGGTCTCTCTCTGACCTGTATGCTATTTTTCCTCATTTCGGTCATCTATAAGAAGTTCCAGCTTGGCTGTGCTATAGGCCACAATGAGACAGCAGTGGAGAGGAAGAGTCCCCCAAGCCTCAACACAAGCTGTGAGGCCCAGATGTTCACAGCTGACTCACAGATGTTCTACACAGTGCCCATTATGGCTTTTGCTTTTGTCTGCCACCCTGAGGTGCTGCCCATCTACACAGAACTCTGCCGGCCCTCCAAGCGCAGAATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTGCATGTACGCACTCACAGCGACCTTTGGCTACCTGACCTTCTACAGCAGTGTGGAGGCGGAGATGCTGCACATGTACAGCCAGCAGGATCTGCTCATCCTCTGTGTGCGCCTAGCCGTGCTGCTTGCGGTGACTCTCACTGTGCCAGTCGTGCTGTTCCCTATCCGCCGGGCTCTGCAGCAGCTGCTCTTCCCAAGCAAGGCCTTCAGCTGGCCACGCCATGTGGCCATAGCCCTGATCCTCCTTGTCTTGGTCAATGTCCTCGTCATCTGCGTGCCAACTATCCGGGATATCTTTGGGGTTATCGGGTCCACCTCAGCCCCCAGCCTCATTTTCATCCTTCCCAGCGTCTTCTACCTCCGCATTGTACCCTCTGAGGTGGAGCCCCTCTACTCCTGGCCCAAGATCCAGGCTCTGTGTTTTGGTATCCTGGGGGTCCTCTTCATGGCGATCAGTCTAGGTTTCATGTTTGCCAACTGGGCCACAGGCCAGAGCCATGTATCTGGACACTGA

Related Sequences

bmy_21803T0 Protein

Length: 437 aa      View alignments
>bmy_21803T0
MCARALPLTRSSRGRHRLECQCSTSATPSWAAASWGWPMPWPTQGSSSSCEALLLCIALLSSYSIHLLLTCAGVVGIRAYEQLGQRALGPVGKVVVAAVICLHNVGAMSSYLFIIKSELPLVIGTFLDMDPEGDWFLKGNLLIIIVSVLIILPLALMRHLGYLGYTSGLSLTCMLFFLISVIYKKFQLGCAIGHNETAVERKSPPSLNTSCEAQMFTADSQMFYTVPIMAFAFVCHPEVLPIYTELCRPSKRRMQAVANVSIGAMFCMYALTATFGYLTFYSSVEAEMLHMYSQQDLLILCVRLAVLLAVTLTVPVVLFPIRRALQQLLFPSKAFSWPRHVAIALILLVLVNVLVICVPTIRDIFGVIGSTSAPSLIFILPSVFYLRIVPSEVEPLYSWPKIQALCFGILGVLFMAISLGFMFANWATGQSHVSGH*