Sequence detailsbmy_21803 (Coding sequence)

Part of scaffold_3272 (SequenceType object (1))

For more information consult the page for scaffold_3272 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC38A5ENSBTAG00000011854 (Cow)

Gene Details

Sodium-coupled neutral amino acid transporter 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000015740, Cow)

Protein Percentage 87.61%
cDNA percentage 88.53%
Ka/Ks Ratio 0.34125 (Ka = 0.0885, Ks = 0.2595)

SLC38A5 (Minke Whale)

Gene Details

solute carrier family 38, member 5

External Links

Gene match (Identifier: BACU008472, Minke Whale)

Protein Percentage 90.14%
cDNA percentage 92.05%
Ka/Ks Ratio 0.52784 (Ka = 0.0711, Ks = 0.1347)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC38A5 (Human)   Slc38a5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1311 bp    Location:50878..43252   Strand:-
Raw sequence 
>bmy_21803
ATGTGTGCCCGGGCCTTGCCCCTTACCCGCAGTTCGAGGGGAAGACATCGTTTGGAATGTCAGTGTTCAACCTCAGCAACGCCATCATGGGCAGCGGCATCCTGGGGCTGGCCTATGCCATGGCCCACACAGGGGTCCTCTTCTTCTTGTGAGGCCCTGCTGCTCTGCATCGCTCTTCTGTCTTCGTACTCCATCCATCTCCTGCTGACCTGTGCTGGTGTTGTAGGCATCCGAGCCTATGAACAGCTGGGACAGAGGGCGCTGGGGCCTGTGGGGAAGGTAGTGGTGGCCGCGGTCATCTGTCTGCACAATGTTGGGGCCATGTCCAGTTACCTGTTCATCATCAAATCCGAACTCCCCCTGGTTATCGGCACTTTCCTGGACATGGACCCTGAGGGGGACTGGTTCTTGAAGGGAAACCTCCTCATCATCATTGTCAGTGTGTTAATCATCCTGCCACTGGCCCTCATGAGACACTTGGGCTACCTGGGGTATACCAGTGGTCTCTCTCTGACCTGTATGCTATTTTTCCTCATTTCGGTCATCTATAAGAAGTTCCAGCTTGGCTGTGCTATAGGCCACAATGAGACAGCAGTGGAGAGGAAGAGTCCCCCAAGCCTCAACACAAGCTGTGAGGCCCAGATGTTCACAGCTGACTCACAGATGTTCTACACAGTGCCCATTATGGCTTTTGCTTTTGTCTGCCACCCTGAGGTGCTGCCCATCTACACAGAACTCTGCCGGCCCTCCAAGCGCAGAATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTGCATGTACGCACTCACAGCGACCTTTGGCTACCTGACCTTCTACAGCAGTGTGGAGGCGGAGATGCTGCACATGTACAGCCAGCAGGATCTGCTCATCCTCTGTGTGCGCCTAGCCGTGCTGCTTGCGGTGACTCTCACTGTGCCAGTCGTGCTGTTCCCTATCCGCCGGGCTCTGCAGCAGCTGCTCTTCCCAAGCAAGGCCTTCAGCTGGCCACGCCATGTGGCCATAGCCCTGATCCTCCTTGTCTTGGTCAATGTCCTCGTCATCTGCGTGCCAACTATCCGGGATATCTTTGGGGTTATCGGGTCCACCTCAGCCCCCAGCCTCATTTTCATCCTTCCCAGCGTCTTCTACCTCCGCATTGTACCCTCTGAGGTGGAGCCCCTCTACTCCTGGCCCAAGATCCAGGCTCTGTGTTTTGGTATCCTGGGGGTCCTCTTCATGGCGATCAGTCTAGGTTTCATGTTTGCCAACTGGGCCACAGGCCAGAGCCATGTATCTGGACACTGA

Related Sequences

bmy_21803T0 SequenceType object (3)

Length: 437 aa      View alignments
>bmy_21803T0
MCARALPLTRSSRGRHRLECQCSTSATPSWAAASWGWPMPWPTQGSSSSCEALLLCIALLSSYSIHLLLTCAGVVGIRAYEQLGQRALGPVGKVVVAAVICLHNVGAMSSYLFIIKSELPLVIGTFLDMDPEGDWFLKGNLLIIIVSVLIILPLALMRHLGYLGYTSGLSLTCMLFFLISVIYKKFQLGCAIGHNETAVERKSPPSLNTSCEAQMFTADSQMFYTVPIMAFAFVCHPEVLPIYTELCRPSKRRMQAVANVSIGAMFCMYALTATFGYLTFYSSVEAEMLHMYSQQDLLILCVRLAVLLAVTLTVPVVLFPIRRALQQLLFPSKAFSWPRHVAIALILLVLVNVLVICVPTIRDIFGVIGSTSAPSLIFILPSVFYLRIVPSEVEPLYSWPKIQALCFGILGVLFMAISLGFMFANWATGQSHVSGH*