Sequence detailsbmy_21808 (Coding sequence)

Part of scaffold_3272 (SequenceType object (1))

For more information consult the page for scaffold_3272 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBC1D25ENSTTRG00000008584 (Bottlenosed dolphin)

Gene Details

TBC1 domain family, member 25

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008138, Bottlenosed dolphin)

Protein Percentage 99.1%
cDNA percentage 98.45%
Ka/Ks Ratio 0.08788 (Ka = 0.0042, Ks = 0.0474)

TBC1D25ENSBTAG00000009288 (Cow)

Gene Details

TBC1 domain family member 25

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012236, Cow)

Protein Percentage 96.41%
cDNA percentage 93.46%
Ka/Ks Ratio 0.0753 (Ka = 0.0183, Ks = 0.2437)

TBC1D25 (Minke Whale)

Gene Details

TBC1 domain family, member 25

External Links

Gene match (Identifier: BACU008476, Minke Whale)

Protein Percentage 99.07%
cDNA percentage 98.86%
Ka/Ks Ratio 0.1223 (Ka = 0.0041, Ks = 0.0339)

Additional orthologs identified in other species via the OPTIC pipeline.

TBC1D25 (Human)   Tbc1d25 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2124 bp    Location:111866..124437   Strand:+
Raw sequence 
>bmy_21808
ATGGCTACGGCCTCTGGATCCTCGGACTTGGCCGGCTCCGGAGCGCCCCCGCCTGGTGGGGGAGCCCAAGCGGCAGCTGAGGAGGAAGAGCGAGAGGTGGTGCGGGTCCGAGTCAAGATCACCTCACTCGATGTGTTACAGCACATCCTCATCCGAGCCTTTGACTTGAACGGGAAGAAGAATTTTGGTATCAGCTACCTGGGCCGGGATCGGCTGGGGCAGGAAGCTTATCTCTCACTCCTGTCTGACTGGGACCTCAGCACGGCCTTCGCCACCGCCTCCAAACCTTACCTGCAGCTGCGTGTAGATATTCGGCCCACTGAGGATAGGAGAGTGGAGTGGCTCATTGCCCTGTGGGTGGCCTGGCTTTGGAGGGAGAGGAACCCGGCCCTGAGGTCTGGGGTTCTCATCCGCATTCTCATACGGCGTCATTCTGTGTGCCCAGGCCCGCTGCTGGAAGACTGGGACATAATCAGCCCCAAGGATGTCATTGGCTCCGACGTGCTGCTGGCTGAGAAGCGGTCATCGCTGACGACAGCTGCCCTGCCCTTCACACAGTCCATCCTCTCTCAGGTGGGCCGCACCTTATCCAAGGTCCAGCAGGTGCTGAGCTGGTCATATGGGGAAGATGTCAAGCCCTTCAAGCCTCCCCTGAGYGATGCGGAGTTTCACACATACCTGAACCATGAGGGCCAGCTCTCCCGCCCCGAGGAGTTGCGCCTGCGGATCTACCATGGTGGCGTTGAGCCCTCCCTGCGAAAGGTGGTGTGGAGGTACCTTCTGAACGTGTACCCAGACGGGCTGACAGGCCGCGAGCGGATGGACTACATGAAACGCAAGAGCCGCGAGTATGAGCAGCTCAAGAGCGAGTGGGCCCAGCGAGCAAGCCCCGAGGACCTGGAGTTCATCCGCAGCACGGTCCTCAAGGACGTGCTGCGTACCGACCGGGCCCACCCCTACTTCGCGGGGCCCGAGGACGGCCCACACCTGCGGGCTCTGCACGACCTGCTCACCACTTACGCCGTTACCCACCCACAGGTGTCCTACTGCCAGGGCATGAGCGACCTGGCCTCGCCCATCCTTGCCGTCATGGACCACGAGGGCCATGCCTTCGTCTGCTTTTGTGGCATCATGAAGCGCCTGGCTGCGAACTTCCACCCTGATGGCCGCGCCATGGCCACCAAGTTCGCTCACCTCAAGCTGCTGCTGCGACACGCCGACCCTGACTTCTACCAGTACTTGCAGGAAGCCGGTGCTGATGACCTCTTCTTCTGTTACCGCTGGCTGCTGCTCGAGCTCAAGCGCGAGTTCGCCTTTGATGACGCTCTCCGCATGCTGGAGGTCACCTGGAGCTCGCTGCCCCCCGACCCTCCCGAGCATGAGGTAGAGCTCGTGGGCCCCCCCAGCCTGGTGGCGGACACTGGCTTTGGGGGCCACAGGGGACGGCCCGTGCGGCAGAGGCACATGCTGAGGCCCGCCGGTGGAGGAGGTGGTGCTTTTGAAGATGCTGTTGACCACTTGGCCGCCACCAGCCAGGGGCCTGGTGGCGGGGGGCGTCTCCTGAGACAGGCCAGTCTGGATGACCTCCAGCAACTCAGGGATAACACAGGCCCCAGGAGGGACCTCCTGGTCCAGCTGCCCCACCCAGCTGCCCTCATCAGCTCCAAGTCTCTCTCTGAGCCCTTGCTGAACTCCTCAGACCCACTGCTTTCCTCCTCTTCCCACCCTGATTCCCCATCGTCTTCATCTCCGCCATCCACCCAGGACGCCTCTCCCACTGGTGACGTGACTGCAGGATCCCCCTTGATGCCAGAGGTGGGCTCCCCACAAGACCCTGGGAAGTCCCTGCCACCCCCACCCCCACTGGGCCTGCCCCCGCCCCAGGAGTTCGGCCGAGGGAACCCATTCATGCTCTTCCTGTGCCTCGCCATCCTGCTGGAGCACCGCGACCACATCATGCGCAACGGGCTGGATTACAACGAGCTGGCCATGCACTTTGACCGCCTCGTGCGAAAACACCACCTGGGGCGCGTCCTACGCCGGGCCAAGGCTCTCTTCGCTGATTACCTGCAGTCAGAGGTGTGGGACTCAGAGGAGGGGGCCGAGGCCACAGCCCCATCTTGA

Related Sequences

bmy_21808T0 SequenceType object (3)

Length: 708 aa      View alignments
>bmy_21808T0
MATASGSSDLAGSGAPPPGGGAQAAAEEEEREVVRVRVKITSLDVLQHILIRAFDLNGKKNFGISYLGRDRLGQEAYLSLLSDWDLSTAFATASKPYLQLRVDIRPTEDRRVEWLIALWVAWLWRERNPALRSGVLIRILIRRHSVCPGPLLEDWDIISPKDVIGSDVLLAEKRSSLTTAALPFTQSILSQVGRTLSKVQQVLSWSYGEDVKPFKPPLSDAEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGRERMDYMKRKSREYEQLKSEWAQRASPEDLEFIRSTVLKDVLRTDRAHPYFAGPEDGPHLRALHDLLTTYAVTHPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFHPDGRAMATKFAHLKLLLRHADPDFYQYLQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPEHEVELVGPPSLVADTGFGGHRGRPVRQRHMLRPAGGGGGAFEDAVDHLAATSQGPGGGGRLLRQASLDDLQQLRDNTGPRRDLLVQLPHPAALISSKSLSEPLLNSSDPLLSSSSHPDSPSSSSPPSTQDASPTGDVTAGSPLMPEVGSPQDPGKSLPPPPPLGLPPPQEFGRGNPFMLFLCLAILLEHRDHIMRNGLDYNELAMHFDRLVRKHHLGRVLRRAKALFADYLQSEVWDSEEGAEATAPS*