Sequence details bmy_21816 (Coding sequence)

Part of scaffold_3270 (Scaffold)

For more information consult the page for scaffold_3270 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIP10 ENSBTAG00000047424 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054576, Cow)

Protein Percentage 96.25%
cDNA percentage 93.54%
Ka/Ks Ratio 0.05076 (Ka = 0.016, Ks = 0.3157)

TRIP10  (Minke Whale)

Gene Details

thyroid hormone receptor interactor 10

External Links

Gene match (Identifier: BACU002560, Minke Whale)

Protein Percentage 99.17%
cDNA percentage 99.17%
Ka/Ks Ratio 0.14175 (Ka = 0.0036, Ks = 0.0254)

Additional orthologs identified in other species via the OPTIC pipeline.

TRIP10 (Human)   Trip10 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1848 bp    Location:105582..114648   Strand:+
Raw sequence 
>bmy_21816
ATGGATTGGGGCACCGAACTGTGGGATCAGTTTGAGGTGCTCGAGCGGCACACGCAGTGGGGTCTGGACCTGTTGGACAGATACGTGAAGTTCGTGAAAGAGCGGACGGAGGTGGAGCAGGCTTATGCAAAGCAGCTGCGGAGCCTGGTGAAAAAATATATGCCCAAAAGACCTGGCAAAGATGACCCAGAATCCAAGTTCAGCCAGCAGCAGTCATTTGTGCAGATTCTCCAGGAGGTGAATGATTTTGCGGGCCAGCGGGAGCTGGTGGCCGAGAGCCTCAGTGTCCACGTGTGTCTCGAGCTGGCCAAGTACTCACAGGAGATGAAACAGGAGAGAAAGATGCACTTCCAAGAAGGCCGTCGGGCCCAGCAGCAGCTGGAAAGTGGCTTCAAGCAGCTGGAGAATAGTAAGCGTAAGTTTGAGCGGGACTGCCGGGAGGCTGAGAAGGCAGCTCAGACGGCCGAGCGGCTGGACCAGGATATCAATGCTACCAAGGCTGATGTGGAGAAGGCCAAGCAACAAGCCCACCTTCGGAGTCACATGGCAGAAGAAAGCAAAAATGAGTATGCAGCCCAACTACAGCGCTTCAACCGAGACCAGGCTCAATTCTATTTCTCCCAGATGCCCCAGATATTTAATAAGCTGCAGGACATGGACGAGCGGCGGGCCACCCACCTTGGGGCTGGGTACAGGCTCCTGTCAGAGGCTGAGCTGCAGGTGGTACCCATCATCGCCAAGTGTTTGGAGGGCATGAAGGTGGCTGCGGATGCTGTGGATGCCAAGAACGACTCCCAGGTCCTAATCGAGCTGCACAAGTCAGGCTTTGCCCGCCCGGGCGACGTGGAATTTGAAGACTTCAGCCAGCCCATGAACCGCGTGCCCTCGGACAGCAGCCTGGGCACCCCCTCAGATGGACGGCCCGAGCTCCGAGGCCCTGGCCGCAGCCGGGCTAAGCGCTGGCCCTTCGGCAAGAAGAACAAGGTGGGGGCCGGGGCCCTTGGGGTGGAGGGGATGGGTCCGCGCCCTCCACCCCTCTCCCCCCTGGGGGGCCCCCTGCCCTCGGCATTACCTAACGGACCCCCGTCCCCCCGCTCCGGCCTCGACCCCTTGGCCATACTGAGTGAGATCAGTAAGTCAGTCAAACCGCGGCTAGCATCCTTCCGCAGCCTTCGAGGCAGCCGTGGGACAGTGGTGACCGAGGATTTCAGCCACTTGCCCCCAGAGCAGCAGAGAAAGCGGCTTCAGCAGCAGCTGGAAGAACGGAACCGTGAACTACAGAAGGAGATCGACCAGAGGGAGGCCTTGAAGAAAATGAAGGATGTATATGAGAAGACACCCCAGATGGGGGACCCGGCCAGCTTGGAACCCCGGATCACAGAAACCCTGAACAACATCGAACGGCTGAAATTGGAAGTACAGAAGTATGAGGCTTGGCTGGCAGAAGCCGAGAGCCGGGTCCTAAGCAACAGGGGGGACACCCTGGGCCGGCACACTCGGCCTCCAGACCCCCCAGCCAGCGCCCCACCAGACAGCAGCAGCAACAGCAACAACGGATCACAGGATAATAAGGAGAGCTCTGAAGAGCCCCGCTCCGAGGAGGGTCAGGATGCTCCCATCTACACGGAGTTCGATGAGGATTTTGAGGAGGAGCCTGCATCCCCCATAGGTCACTGTGTGGCCATCTACCATTTTGAAGGGTCCAGCGAGGGCACCATCTCCATGGCTGAGGGCGAGGACCTCAGTCTCATGGAAGAAGATAAAGGCGACGGCTGGACCCGGGTCAGGCGGAAACAGGGAGGTGAGGGCTACGTGCCCACCTCCTACCTCCGTGTCACACTCAACTGA

Related Sequences

bmy_21816T0 Protein

Length: 616 aa      
>bmy_21816T0
MDWGTELWDQFEVLERHTQWGLDLLDRYVKFVKERTEVEQAYAKQLRSLVKKYMPKRPGKDDPESKFSQQQSFVQILQEVNDFAGQRELVAESLSVHVCLELAKYSQEMKQERKMHFQEGRRAQQQLESGFKQLENSKRKFERDCREAEKAAQTAERLDQDINATKADVEKAKQQAHLRSHMAEESKNEYAAQLQRFNRDQAQFYFSQMPQIFNKLQDMDERRATHLGAGYRLLSEAELQVVPIIAKCLEGMKVAADAVDAKNDSQVLIELHKSGFARPGDVEFEDFSQPMNRVPSDSSLGTPSDGRPELRGPGRSRAKRWPFGKKNKVGAGALGVEGMGPRPPPLSPLGGPLPSALPNGPPSPRSGLDPLAILSEISKSVKPRLASFRSLRGSRGTVVTEDFSHLPPEQQRKRLQQQLEERNRELQKEIDQREALKKMKDVYEKTPQMGDPASLEPRITETLNNIERLKLEVQKYEAWLAEAESRVLSNRGDTLGRHTRPPDPPASAPPDSSSNSNNGSQDNKESSEEPRSEEGQDAPIYTEFDEDFEEEPASPIGHCVAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTRVRRKQGGEGYVPTSYLRVTLN*