Part of scaffold_3316 (Scaffold)

For more information consult the page for scaffold_3316 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPLAD2 ENSTTRG00000005314 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase-like A domain containing 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005015, Bottlenosed dolphin)

Protein Percentage 88.2%
cDNA percentage 91.95%
Ka/Ks Ratio 0.46836 (Ka = 0.0703, Ks = 0.1502)

BT.45949 ENSBTAG00000017741 (Cow)

Gene Details

3-hydroxyacyl-CoA dehydratase 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023587, Cow)

Protein Percentage 83.89%
cDNA percentage 87.04%
Ka/Ks Ratio 0.27146 (Ka = 0.0925, Ks = 0.3409)

PTPLAD2  (Minke Whale)

Gene Details

protein tyrosine phosphatase-like A domain containing 2

External Links

Gene match (Identifier: BACU006613, Minke Whale)

Protein Percentage 75.82%
cDNA percentage 81.05%
Ka/Ks Ratio 0.58737 (Ka = 0.1975, Ks = 0.3362)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 546 bp    Location:71717..48246   Strand:-
>bmy_21829
ATGGGACCCGTGGAGCTGCCCGCCTGGCTGCAGCCCAGTTTTCCAAAAAATGAATCACTGTCATTTAACATTCTGACTGTCAAAATAACATTCTTTTCATGTTCCATCCCCACATGGCTCACTGAGAGAATAATCATCCTCTTTGTGGTGATCACCAGTCAAGAGGAAGTCCAAGAGAAATACGTGGTGTGTGTTTTATTCATCTTTTGGAATCTATTGGATATGGTTAGGTACACTTACAGCATGTTATCAGTCATTGGAATATCCTATGCTGTCTTGACATGGCTCAGTCAAACACTATGGATGCCGATTTATCCTTTGTGTGTTCTCGCTGAAGCATTTGCCATCTATCAGTCACTGCCTTATTTTGAATCATTTGGCACTTACTCCACAAAGCTGCCCTTTGACTTATCCATCTATTTCCCATATGTGCTGAAAATATATCTCATGATGCTCTTTATAGGTATGTATTTTACCTACAGTCATCTTTACTCAGAAAGAAGAGACATCCTCAGAGTCTTTCCCATTAAAAAGAAGAAAATGTGA

Related Sequences

bmy_21829T0 Protein

Length: 182 aa      View alignments
>bmy_21829T0
MGPVELPAWLQPSFPKNESLSFNILTVKITFFSCSIPTWLTERIIILFVVITSQEEVQEKYVVCVLFIFWNLLDMVRYTYSMLSVIGISYAVLTWLSQTLWMPIYPLCVLAEAFAIYQSLPYFESFGTYSTKLPFDLSIYFPYVLKIYLMMLFIGMYFTYSHLYSERRDILRVFPIKKKKM*