Sequence detailsbmy_21861 (Coding sequence)

Part of scaffold_3329 (SequenceType object (1))

For more information consult the page for scaffold_3329 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP39ENSTTRG00000008973 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 39

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008511, Bottlenosed dolphin)

Protein Percentage 80.46%
cDNA percentage 79.97%
Ka/Ks Ratio 0.10531 (Ka = 0.0089, Ks = 0.0848)

USP39ENSBTAG00000010691 (Cow)

Gene Details

U4/U6.U5 tri-snRNP-associated protein 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000014148, Cow)

Protein Percentage 97.06%
cDNA percentage 94.12%
Ka/Ks Ratio 0.0562 (Ka = 0.0139, Ks = 0.2476)

Additional orthologs identified in other species via the OPTIC pipeline.

USP39 (Human)   Usp39 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1446 bp    Location:21392..863   Strand:-
Raw sequence 
>bmy_21861
ATGTCCGGCCGGTCCAAGCGGGAGTCTCGTGGTTCCACCCGCGGGAAGCGCGAGTCTGAGTCGCGGAGCAGCTCAGCTCGTGTCAGACGGGAGCGAGATCGGGAGCGGGAGACCGAGGCTCCGAGCTCCCGGGGCAGTCCGGTGCGCGTGAAGCGGGAGATCGAGCCGGCGAGCGCGCGCGAGGCCCTGGCGCCCGTGGTCCCGGCGGTGCGGGTGAAGCGGGAGCGCGAGGCCGACGAGGACTCGGAGCCTGAGCGGGAGCTTTTGATGCTTTTCCTTTCAGCAAAGAATGGCCGCATGGATTCTGAGGATCGGAGGAGCCGCCACTGCCCCTACCTGGATACCATTAACAGGAGTGTGCTGGACTTTGACTTTGAGAAACTGTGTTCCATCTCCCTCTCGCATATCAATGCATATGCCTGTCTGGTGTGTGGCAAGTACTTTCAGGGCCGGGGTTTGAAGTCTCACGCCTACATTCACAGTGTCCAGTTTAGTCACCATGTCTTCCTCAACCTCCACACCCTCAAGTTTTACTGCCTCCCAGACAACTATGAGATCATCGATTCCTCGCTGGAGGATATCACGTATGTGTTGAAGCCCACTTTCACAAAGCAGCAGATCGCTAACTTGGACAAGCAAGCCAAGTTGTCCCGGGCATATGATGGCACCACTTACCTGCCCGGTATCGTGGGCCTGAATAACATAAAGGCCAACGACTACGCCAATGCCGTCCTTCAGGCTCTGTCTAATGTTCCTCCTCTCCGGAACTACTTCCTGGAAGAAGACAATTATAAGAACATCAAGCGTCCTCCCGGGGATATCATGTTCTTGTTGGTCCAGCGTTTTGGAGAGCTGATGAGAAAGCTCTGGAACCCTCGAAATTTCAAGGCACATGTCTCTCCCCATGAGATGCTTCAAGCTGTCGTCCTTTGCAGCAAGAAGACTTTTCAGATCACCAAGCAAGGGGATGGAGTCGACTTTCTCTCCTGGTTTTTGAATGCTCTACACTCAGCTCTGGGGGGCACAAAGAAGAGAAAAAAGACTATTGTGACTGATGTTTTCCAGGGTTCCATGAGGATCTTCACTAAAAAGCTTCCTCATCCTGATTTGCCAGCAGAAGAAAAAGAGCAGCTGCTCCATAATGATGAGTACCAAGAGACGATGGTGGAGTCCACGTTTATGTACCTGACGCTGGACCTTCCTACTGCCCCCCTCTACAAGGACGAGAAGGAGCAGCTCATTATCCCCCAGGTGCCGCTCTTCAACATCTTGGCCAAGTTCAACGGCATCACTGAGAAGGAATATAAGACTTACAAGGAGAACTTTCTGAAGCGCTTCCAGCTCACCAAGCTGCCTCCATATTTAATCTTTTGTATTAAGAGATTCACTAAGAACAATTTCTTTGTGGAGAAGAATCCGACTATTGTCAACTTCCCTATTACGTGA

Related Sequences

bmy_21861T0 SequenceType object (3)

Length: 482 aa      View alignments
>bmy_21861T0
MSGRSKRESRGSTRGKRESESRSSSARVRRERDRERETEAPSSRGSPVRVKREIEPASAREALAPVVPAVRVKREREADEDSEPERELLMLFLSAKNGRMDSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKRKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPIT*