Sequence details bmy_21864 (Coding sequence)

Part of scaffold_3329 (Scaffold)

For more information consult the page for scaffold_3329 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF181 ENSTTRG00000008970 (Bottlenosed dolphin)

Gene Details

ring finger protein 181

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008508, Bottlenosed dolphin)

Protein Percentage 99.32%
cDNA percentage 98.65%
Ka/Ks Ratio 0.05308 (Ka = 0.0029, Ks = 0.0547)

RNF181 ENSBTAG00000018286 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF181

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024336, Cow)

Protein Percentage 95.95%
cDNA percentage 94.14%
Ka/Ks Ratio 0.08661 (Ka = 0.0185, Ks = 0.2134)

RNF181  (Minke Whale)

Gene Details

ring finger protein 181

External Links

Gene match (Identifier: BACU005910, Minke Whale)

Protein Percentage 99.32%
cDNA percentage 99.1%
Ka/Ks Ratio 0.10987 (Ka = 0.003, Ks = 0.0277)

Additional orthologs identified in other species via the OPTIC pipeline.

RNF181 (Human)   Rnf181 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 447 bp    Location:38514..35544   Strand:-
Raw sequence 
>bmy_21864
ATGGCGTCTTATTTCGATGAACACGACTGCGAGCCGTTGCACCCCGAGCAGGATGCCCGAACCAACATGCTGCTGGAGCTCGCAAGGATGGACTTCGAAGACTTGGGGTTGGTAGTAGATTGGGATCACCACCTGCCTCCACCTGCTGCCAAGACTGCAGTTGAGAACCTCCCCAGGACAGTCATCAGGGGCTCTCAGGCTGAGCTCAAGTGCCCCGTGTGTCTTTTGGAATTTGAGGAGGAGGAGACTGCCATTGAGATGCCTTGCCATCACCTCTTCCACTCCAACTGCATTCTGCCCTGGCTGAGCAAGACAAATTCCTGCCCCCTGTGCCGCCACGAGCTGCCCACTGATGATGACACTTACGAGGAGTATAGACGAGATAAGGCTCGCAAGCAGCAGCAGAAGCACCGACTCGAGAACCTCCATGGCGCCATGTACACATGA

Related Sequences

bmy_21864T0 Protein

Length: 149 aa      View alignments
>bmy_21864T0
MASYFDEHDCEPLHPEQDARTNMLLELARMDFEDLGLVVDWDHHLPPPAAKTAVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDTYEEYRRDKARKQQQKHRLENLHGAMYT*