Part of scaffold_3393 (Scaffold)

For more information consult the page for scaffold_3393 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCNT2 ENSTTRG00000014878 (Bottlenosed dolphin)

Gene Details

cyclin T2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014106, Bottlenosed dolphin)

Protein Percentage 95.97%
cDNA percentage 97.54%
Ka/Ks Ratio 0.49071 (Ka = 0.02, Ks = 0.0407)

BT.36651 ENSBTAG00000014158 (Cow)

Gene Details

cyclin-T2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018816, Cow)

Protein Percentage 93.93%
cDNA percentage 95.5%
Ka/Ks Ratio 0.3376 (Ka = 0.0311, Ks = 0.092)

CCNT2  (Minke Whale)

Gene Details

cyclin T2

External Links

Gene match (Identifier: BACU020260, Minke Whale)

Protein Percentage 98.12%
cDNA percentage 98.46%
Ka/Ks Ratio 0.23957 (Ka = 0.0086, Ks = 0.0359)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1788 bp    Location:101524..82084   Strand:-
>bmy_21882
ATGCTACAAACCCTAGGTTTTGAGATCACCATTGAACACCCACACACAGATGTGGTGAAATGTACCCAGTTAGTAAGAGCAAGCAAGGATTTGGCACAGACATCCTATTTCATGGCTACCAACAGTCTGCATCTTACAACCTTCTGTCTTCAGTATAAACCAACAGTGATAGCATGTGTATGCATTCATTTGGCTTGCAAATGGTCCAATTGGGAGATTCCCGTGTCAACTGATGGAAAACATTGGTGGGAATATGTGGATCCTACAGTTACTCTGGAATTACTAGATGAGCTAACACATGAGTTTCTACAAATATTGGAGAAAACGCCTAGTAGGTTGAAGAGGATTCGAAACTGGAGGGCTAATCAGGCGGCTAAGAAACCAAAAGTAGATGGACAAGTATCAGAAACACCACTTCTTGGTTCATCTTTGGTCCAGAATTCCATTTTAGTAGATAGTGTTACTGGTGTGCCTACCAACCCAAGTTTTCAGAAACCATCTACATCAACATTCCCTGCACCAGTACCTCTAAATTCAGGAAATATTTCTGTTCAAGACAGCCATGCGTCTGATAATTTGTCAGTGCTAGCAACAGGAATGCCGAGTACCTCATATGGTTTGTCATCACACCAAGAATGGCCTCAACATCAAGAGTCGGCAAGGACAGAACAGATATATTCACAGAAACAGGAGACATCTTTGTCTGGTAGCCAATACAGCATCAACTTCCAGCAGGGACCTTCTGTATCACTGCATTCAGGATTACATCACAGACCTGACAAAATTTCTGACCATTCTTCTATTAAGCAAGATTACACTCATAAAGCAGGAAGCAGTAAACACCATGGGCCAACTTCTGGTACTCCTGGAGTAATTCCTCAGAAAATGTCTTTAGATAAATACAGAGAAAAACGTAAGCTAGAAACCCTTGATCTGGATGCAAGGGATCATTATATAGCTGCCCAGGTAGAACAGCAACACAAACATGTACAGTCCCAGGCAGCCAGCAGCAGTTCTGTAACCTCTCCCATTAAAATGAAAATTCCCATTGCAAATGCTGAAAAACCTGACAAATACATGGCAGATAAGAAGGAAAAGAGTGGATCGCTGAAATTACGGATTCCAATACCACCCACTGATAAAAGTGTCAGTAAAGAAGAACTGAAAATGAAGATAAAAGTTTCTTCCTCAGAAAGACACAGCTCTTCTGATGAAGGCAGTGGCAAGAGCAAGCATGCAAGCCCGCATGTGAGCAGGGACCATAAGGAGAAGCGCAAGGAGCACCCTGCCAGCCGCCACCACCCCGGCGGTCACAAGTGCTCCCACGCGCACAGTGGCAGCGGCAGTGGTGGCAGCAAGCACAGTGCTGATGGGGTGCCACCCACTGTGCTGAGGAGTCCTGTTGGCCTGAGCAGTGACGGCATTTCCTCTAGTTCCAGCTCTTCAAGGAAGAAGCTGCATATCAGTGATGCCTCTCACAACCATCACTCCAAAATGAGCAAAAGTTCCAAAAGTTCAGGTAGTTCATCTAGTTCTTCCTCCTCTGTTAAGCAGTATGTATCCTCTCACAACTCTGTTTTTAACCATCCCTTACCCCCTCCTCCCCCTGTCACATACCAGGTGGGCTACGGACATCTCAGCACCCTCGTGAAACTGGACAAGAAGCCAGTGGAGACCAACGGTCCTGAGGTCAATCACGAGTTCAGTGCACACAGCCAGCATATGGACTACAAAGACACATTCGACATGCTGGACTCGCTGCTAAGTGCCCAAGGAATGAACATGTGA

Related Sequences

bmy_21882T0 Protein

Length: 596 aa      View alignments
>bmy_21882T0
MLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQILEKTPSRLKRIRNWRANQAAKKPKVDGQVSETPLLGSSLVQNSILVDSVTGVPTNPSFQKPSTSTFPAPVPLNSGNISVQDSHASDNLSVLATGMPSTSYGLSSHQEWPQHQESARTEQIYSQKQETSLSGSQYSINFQQGPSVSLHSGLHHRPDKISDHSSIKQDYTHKAGSSKHHGPTSGTPGVIPQKMSLDKYREKRKLETLDLDARDHYIAAQVEQQHKHVQSQAASSSSVTSPIKMKIPIANAEKPDKYMADKKEKSGSLKLRIPIPPTDKSVSKEELKMKIKVSSSERHSSSDEGSGKSKHASPHVSRDHKEKRKEHPASRHHPGGHKCSHAHSGSGSGGSKHSADGVPPTVLRSPVGLSSDGISSSSSSSRKKLHISDASHNHHSKMSKSSKSSGSSSSSSSSVKQYVSSHNSVFNHPLPPPPPVTYQVGYGHLSTLVKLDKKPVETNGPEVNHEFSAHSQHMDYKDTFDMLDSLLSAQGMNM*