Part of scaffold_3349 (Scaffold)

For more information consult the page for scaffold_3349 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZC3H12B ENSTTRG00000007468 (Bottlenosed dolphin)

Gene Details

zinc finger CCCH-type containing 12B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007065, Bottlenosed dolphin)

Protein Percentage 82.54%
cDNA percentage 83.28%
Ka/Ks Ratio 0.50435 (Ka = 0.0496, Ks = 0.0984)

ZC3H12B ENSBTAG00000002206 (Cow)

Gene Details

probable ribonuclease ZC3H12B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002858, Cow)

Protein Percentage 92.16%
cDNA percentage 93.0%
Ka/Ks Ratio 0.34958 (Ka = 0.0513, Ks = 0.1468)

ZC3H12B  (Minke Whale)

Gene Details

zinc finger CCCH-type containing 12B

External Links

Gene match (Identifier: BACU011798, Minke Whale)

Protein Percentage 94.97%
cDNA percentage 95.86%
Ka/Ks Ratio 0.53446 (Ka = 0.0357, Ks = 0.0668)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2031 bp    Location:99669..90837   Strand:-
>bmy_21887
ATGCCTTGGCTGTTTGCAAAGGGCACATCGATCGCAACTCTCCTTCCAGTGCCTTTTGTCCACACAGGGCACATTGGTCCTGTCTGTGTATCCATGGGCCTAGTGGTCCAGGAAAAGCTGGCCTCGCACCATGGGAATAAAGAAGAGTTCTCCTGCAGAGGAATACAACTTGCTGTGGAATGGTTTCTAGATAAAGGCCATAAAGACATTACTGTATTTGTGCCTGCGTGGAGAAAGGAGCAATCCCGCCCTGATGCACCAATCACAGATCAAGATATCCTACGTAAACTGGAGAAGGAAAAGATTCTTGTCTTCACACCATCCAGAAGGGTCCAGGGCAGGAGAGTTGTTTGCTATGATGACCGGTTCATAGTCAAACTGGCTTTTGATTCTGATGGCATCATTGTATCCAATGATAACTACCGAGACCTTCAAATTGAAAAGCCAGAATGGAAGAAGTTTATAGAGGAGCGGTTGCTGATGTATTCTTTTGTGAATGACAAATTTATGCCTCCAGATGATCCTTTAGGACGCCATGGCCCAAGCCTTGAAAACTTCTTAAGAAAGAGACCCGTTGTTCCCGAACACAAGAAGCAACCATGCCCTTATGGCAAAAAATGCACCTACGGCCACAAGTGCAAATACTACCATCCGGAGCGGGCCAACCAACCGCAGCGTTCGGTGGCTGATGAGCTCCGCATCAGTGCCAAACTGTCCACAGTGAAAACCATGAGTGAAGGCACCCTGGCCAAGTGTGGTACAGGGCTGTCTAGTACCAAAGGTGACATAACCTCAGAAGTCAAACGTGTGGCCCCCAAGCGCCAATCGGATCCCAGCATCCGTTCCGTGGCTGTGGAGCCTGAGGAATGGCTGTCCATTGCCCGTAAGCCTGAGGCCAGCTCTGTCCCCTCACTTGTGACTGCTCTAAGTGTCCCCACAATCCCACCCCCCAAAAGCCATGCAGTGGGTGCACTCAACACCCGTTCAGCCAGCAGCCCGGTGCCAGGATCCTCTCATTTCTCCCACCAGAAGTCCTCACTGGAGCACATGACCAGCATGCAGTACCCCCCAATCCTGGTTACCAATAGCCATGGGACCCCTATTAGCTACGCTGAGCAATACCCAAAGTTTGAGTCCTTGGGGGACCACGGCTACTATTCAATGTTAGGCGACTTCTCCAAATTGAACATCAACAGCATGCATAATAGAGAGTACTACATGGCTGAAACAGACCGGGGGTTGTATGCCCGGAATCCCAACCTCTGTCCTGACAATCGTATGAGCCATAGCAGGAACGACAGCTATTCCTCTTACAACAACCTGTATTTGGCTGTAGCTGATACTCATCCTGAAGGTAGTTTGAAGCTGCATCGCTCAGCATCTCAGAACCATCTTCAGCCTTTTCCTCATGGTTACCATGAAGCCTTAACGCGAGTGCAGAGCTATGGCCCAGAGGACTCTAAGCAAGCCCCCAACAAGCAATCAGTCCCCCACTTAGTTCTGCATGCCCAGCACCCAACAACTGGAGCACACTCCAGCTGTCCTGGAGACTATCCCATGCCTCCCAATATCCATCCTGGGGCAACTCCCCAGCCAGGACGTGCCCTGGTGATGACTCGGATGGACAGCATTTCTGATTCCCGCCTGTATGAGAGCAACCCCATGAGGCAAAGACRCCCTCCTCTGTGCCGGGAACAACATGCCAGCTGGGACCCACTGCCCTGTGCAACTGACTCCTATGGCTACCACTCCTATCCCTTGAGTAACAGCCTCATGCAACCATGCTATGAGCCAGTCATGGTACGGAGCGTGCCTGAAAAGATGGAGCAGCTTTGGATGAATCCTTGGGTTGGAATGTGCAATGATTCCAGGGAGCATATGATCCCAGAGCACCAGTATCAGACCTACAAGAACCTCTGCAATATTTTCCCTTCAAACATCGTCCTTGCAGTGATGGAGAAGAATCCCCACACAGCAGATGCCCAGCAACTAGCAGCCTTGATTGTTTCTAAGCTTAGGGCTGCACGTTGA

Related Sequences

bmy_21887T0 Protein

Length: 677 aa      View alignments
>bmy_21887T0
MPWLFAKGTSIATLLPVPFVHTGHIGPVCVSMGLVVQEKLASHHGNKEEFSCRGIQLAVEWFLDKGHKDITVFVPAWRKEQSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYRDLQIEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSTVKTMSEGTLAKCGTGLSSTKGDITSEVKRVAPKRQSDPSIRSVAVEPEEWLSIARKPEASSVPSLVTALSVPTIPPPKSHAVGALNTRSASSPVPGSSHFSHQKSSLEHMTSMQYPPILVTNSHGTPISYAEQYPKFESLGDHGYYSMLGDFSKLNINSMHNREYYMAETDRGLYARNPNLCPDNRMSHSRNDSYSSYNNLYLAVADTHPEGSLKLHRSASQNHLQPFPHGYHEALTRVQSYGPEDSKQAPNKQSVPHLVLHAQHPTTGAHSSCPGDYPMPPNIHPGATPQPGRALVMTRMDSISDSRLYESNPMRQRXPPLCREQHASWDPLPCATDSYGYHSYPLSNSLMQPCYEPVMVRSVPEKMEQLWMNPWVGMCNDSREHMIPEHQYQTYKNLCNIFPSNIVLAVMEKNPHTADAQQLAALIVSKLRAAR*