Part of scaffold_3350 (Scaffold)

For more information consult the page for scaffold_3350 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STX16-NPEPL1 ENSTTRG00000010113 (Bottlenosed dolphin)

Gene Details

STX16-NPEPL1 readthrough (NMD candidate)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009591, Bottlenosed dolphin)

Protein Percentage 70.97%
cDNA percentage 76.7%
Ka/Ks Ratio 0.63214 (Ka = 0.2557, Ks = 0.4045)

BT.35446 ENSBTAG00000003872 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005055, Cow)

Protein Percentage 80.22%
cDNA percentage 81.06%
Ka/Ks Ratio 0.252 (Ka = 0.1441, Ks = 0.5719)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 900 bp    Location:110158..51017   Strand:-
>bmy_21896
ATGGGGGAGAGAGGCCCTGAAAGATCAAGCACTCGTCCATACTGTCTGGTACTCTTTAAAGGGGCAGTTGTCAATGTCTACATTGGACCAAGAGCAGAAGATAATTTTGATGAGCTGCACAAGAAGCCTGTGGGTGTGCCATTAGAAGTTGATACTAATTATTGTGCAGATAAATTTAGCCAGAGCAAGTCAAATGCATGTTCACAACTTGCTGATGATCGCATGGCTCTGGTGTCAGGCATTAGCTTAGACCCAGAAGCAGCAATTGGCGTGACAAAGCGGTTACCTCCTAAATGGGTGGATGGAGTGGATGAAATACAGTACGATGTTGGCCGGATTAAACAGAAGATGAAGGAGTTAGCCAGCCTTCATGACCAGCACTTAAACAGACCCACCCTGGATGACAGCAGCGAGCAGGAACATGCCATCGAGATCACCACCCAAGAGGTCACGCAGCTCTTCCACAGGTGCCAGCGTGCGGTGCAGGCGCTGCCCAGCCGGGCCCGCAGGGCCTGCTCGGAGCAGGAGGAGCGGCTCCTTCGCAACGTGGTGGCCTCCCTGGCGCAGGCTCTGCAGGAGCTGTCCACCGGCTTCCGGCGCGCGCAGTCGGGCTACCTCAAGCGCCTGAAGAATCGAGAGGAAAGATCCCAGCATTTTTTTGATACATCAGTACCACTGATGGACGATGGAGACGATAATACTCTTTATGATCGGGGTACCGTCCTTGATAGAATCGACTATAATGTTGAACAGTCCTGTATCAAAACTGAAGATGGCTTGAAACAGCTTCACAAGGCAGAGCAGTATCAGAAGAAGAATCGGAAGATGCTTGTGATTCTAATATTATTTGTCATCATCATTGTCCTCATTGTTGTCCTCGTCGGCGTGAAGTCGCACTGA

Related Sequences

bmy_21896T0 Protein

Length: 300 aa      View alignments
>bmy_21896T0
MGERGPERSSTRPYCLVLFKGAVVNVYIGPRAEDNFDELHKKPVGVPLEVDTNYCADKFSQSKSNACSQLADDRMALVSGISLDPEAAIGVTKRLPPKWVDGVDEIQYDVGRIKQKMKELASLHDQHLNRPTLDDSSEQEHAIEITTQEVTQLFHRCQRAVQALPSRARRACSEQEERLLRNVVASLAQALQELSTGFRRAQSGYLKRLKNREERSQHFFDTSVPLMDDGDDNTLYDRGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNRKMLVILILFVIIIVLIVVLVGVKSH*