Sequence detailsbmy_21904 (Coding sequence)

Part of scaffold_3364 (SequenceType object (1))

For more information consult the page for scaffold_3364 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PMFBP1ENSTTRG00000001916 (Bottlenosed dolphin)

Gene Details

polyamine modulated factor 1 binding protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001798, Bottlenosed dolphin)

Protein Percentage 82.0%
cDNA percentage 85.76%
Ka/Ks Ratio 0.64866 (Ka = 0.0783, Ks = 0.1207)

PMFBP1ENSBTAG00000013266 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017642, Cow)

Protein Percentage 81.57%
cDNA percentage 86.26%
Ka/Ks Ratio 0.39779 (Ka = 0.1213, Ks = 0.305)

Additional orthologs identified in other species via the OPTIC pipeline.

PMFBP1 (Human)   Pmfbp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3006 bp    Location:131084..81134   Strand:-
Raw sequence 
>bmy_21904
ACACTTATTTCTTCGGCCATTCCAAAGTCTCCTTTAGGAAGACCCAACGGGCCCTGCTTCCTCTCCAGAAAAGCCTCAGTCCTGGGGTTGGACTATGACCCAGTCAGTAACCTTGGGATCAGGTTCCTATCACTCAGTTATGGTGCAGAGCCCCAAGCCCTGGCAAAACCACCCCCTCCTACCAMCTCCCCCTATCAGGTTTATAACAAAGCTCAGGAAATGCTAAAGCTTAAAGGAGAATTGAGAGGTGCCCAGGAAATGAAAGATGAGAATAAGAAGCAAGTATCAGCATTTGAGGAGTCACACATGGAGTCTGAGCCCAATAAACAGTGTCATCTGAGACAACTCCAGCAACTCAAGAAAAAGTTGCTGGCCCTTCAGCAAGAACTGGAGTTTCGCACCGAGGAGCTGCAGACTTCTTACTCTTCGCTCCTGCAGTATCAGTCCATCCTGGAGAAGGAGACTTCCGACCTGGTTATTCTCCACCATCACTGCAAGATGAAAGAAGATGAGGTGATTCTCTATGAGGAGGAAATGGGAAATCATAATGAGAAAACAAGGGAGAAGCTCCATTTGGCCCAGGAGCAACTCGCCTTGGCCGGGGACAAAATCCTCTCCCTAGAAAGGAGCTTAAACCTCTACAGGGATAAATACCAGACTTCCCTGAGCAACATCGAGTTACTGGAGTGCCAAGTGAAGATGTTGGAGGGGGAGCTCAGCAGGATCGTCGGTCAGGAGCCCAAGAACAAGGGTGATCATTCAAAGGTGCATATATACACTTCTCCCTGCATGATTCAAGAGCATCAGGAGACCCTGAAACGACTATCTGAAGTCTGGCAGAAGGTCTCTGAACAGGATGATCTAATAAAGGAACTTCGAAATAAGCTAGCCTGCAGTAACGCTTTGGTTCTGGAGCGTGAAGAGGCTTTGATAAAATTACAAGCAGACTTTGCTTCCTATACAGCCACCCACCGACATCCCCCTAGCTCCTCAGAAGATTGTGAAGACATCAAAAAGATACTGAAGCACCTGCAGGAACAGAAAGACAGCGAGTGCCTGCGTGTGGAGGAGTACCAGAACCTCGTGAAGGATTTGCGCATGGAGCTAGAAGCCGTGTCGGAACAGAAGAAAAACATCATGAAGGACATGATGAAGCTGGAGCTGGACCTGCACGGGCTGCGGGAAGAGACATCTGCCCACGTGGAGAGGAAGGACAAGGAGGTCGTCATCCTGCAACGGCGACTGCAGGARCTGCAGGTGCAGTTCACTGAGACCCAGAAGCTTGGTTTGAAGAAAGACAAGGTCCTCCAGGAGAACGATGAAATGCTGCACGAGCTAGAGAAGGACCTGGCGCAGGTTAAGAACACCCTCATAAAAAAGGAGATGGAGTTGGAGAAGCAGCAATGCATGACAAGTCAACTCGAAATTGCCATCCAGGAGGAGAGACAGGATAAGTGCAAGGCCGAGTATGGGCACCTGGGAGCTGAGATCAAGAAGCTGAAGGACTGTCTCGAAGATGCCAAAGAGCAGCACAGGCTGGCTGCTCAGCAAGCAGCCCAATATAAAGAAGAGGCCATTCTGGCAAAGGGTAACCTGGAGGATTGCCATAGGAAGCTGCAGAAGGATTCCCTAATGGCTGAGGAGGAACTCGCACTCAGCAGGAAACGGATAGAGGAGCTGACATCAGAATTATCTGAGTTCTCAAGAAAACTTGAAATTTCAGAGAAGGAAAAGAGGCAGCTTCAGAAGACAGTGACTGAGCAGGGTGTAAAACTGAATGACCTGCTAGATCGTATAAATCACATTCAACACCAGAACAGGAAGCAAGCCTCCTCCAAATGCAGTCTAGAAGAACAGCTCCAAGAGGAAACCAGGCTGCTGGAGGAGAAACGGGAGCAGTTGAAAAAGAGTAAAGAGCAGGAGAAGCTACTGGAGCAAGAGCTCGAGATATTCCGACAGGAAGAAAAAAAGAAAGAAAAGATGATAACCCTTCAGAAGGAGACCATGGCGAGTCTGCAGATTCAGCTGGACAAGGCTGCGGCGAAAGAGAAGCAATACCTCCAGACCACGGTCAGTAAAGAAGTCTATGAGGAGGTATGCCGGAAGTCAGCCTCCTGCCAAGACGACCTAACACAGGCCCTGGAGAAGGACTCAGCAGAGAGGCCCAAGCGCAATGACAGCCGTTCTCCCCCCAACCCTTTGTCTTTACCAAAGCTCAATCATTCGACCTCAGAGACAAACAGTCTTCACCGAAGTCTGACACAGGCCCAAGACAGGAAGATTCAGCTGGAAGAGGAAGTCATTGCTTACGAGGAGAGGATGAAAAAGCTGAATGTGGAGTTAAAAAAACTGCAGGGCTTCCAGCAGCAGAGTGAGCTAGAGGGTCAGGGTGGCAAGCCGGGGTCTCCCTCCTCACTGTGCGCTACCGAGCAGGTGCAGGCCTTCGACAAAAAGCTGGAGGACATGAGCAACCAGGTGCTGCAGTGGCAGAAGCAGCACCAGAGCGACCTCAAGATGCTGGCCGCTAAAGAGGAGCAGCTCAGGGCGTTCCAGGAGGAAATGCGCGCCCTGAGAGAGAACCTCCTCGCGGACGAGAGGGAGCGGTCTGCGCCCAAAGATACCTGCACGCTGCACCGAGAGAATGATCAGATTATGTCCAATATGGAGCAATGGGCAAAAGAGCAGAAGATCGCCAATGAGAAACTAGGAAACAAGCTCCGTGAACAGGTCAAATATATCACCAAGCTGACTGGTGAAAAGGACCACCTCCACGATGTACTGGTCCATCTGCAAAAGGAAAACACGAAACTAAAGAATGAAATAGAGGAGAAGAAGCTGAAAGCTGGGCCCTCAAGGGTATATACCAAAGCCCTATGCCCAAGCAAAACAGACCCCACATCAAGGGGGAAAGTGTACGGCACCTTGGGCTGGAGGGGGATAACCCAAGCTGTGAGCCAAAGAATGGACATCACCAAGTCTGTCGGGATGCCCCACTGCTCAGAATAA

Related Sequences

bmy_21904T0 SequenceType object (3)

Length: 1002 aa      View alignments
>bmy_21904T0
TLISSAIPKSPLGRPNGPCFLSRKASVLGLDYDPVSNLGIRFLSLSYGAEPQALAKPPPPTXSPYQVYNKAQEMLKLKGELRGAQEMKDENKKQVSAFEESHMESEPNKQCHLRQLQQLKKKLLALQQELEFRTEELQTSYSSLLQYQSILEKETSDLVILHHHCKMKEDEVILYEEEMGNHNEKTREKLHLAQEQLALAGDKILSLERSLNLYRDKYQTSLSNIELLECQVKMLEGELSRIVGQEPKNKGDHSKVHIYTSPCMIQEHQETLKRLSEVWQKVSEQDDLIKELRNKLACSNALVLEREEALIKLQADFASYTATHRHPPSSSEDCEDIKKILKHLQEQKDSECLRVEEYQNLVKDLRMELEAVSEQKKNIMKDMMKLELDLHGLREETSAHVERKDKEVVILQRRLQELQVQFTETQKLGLKKDKVLQENDEMLHELEKDLAQVKNTLIKKEMELEKQQCMTSQLEIAIQEERQDKCKAEYGHLGAEIKKLKDCLEDAKEQHRLAAQQAAQYKEEAILAKGNLEDCHRKLQKDSLMAEEELALSRKRIEELTSELSEFSRKLEISEKEKRQLQKTVTEQGVKLNDLLDRINHIQHQNRKQASSKCSLEEQLQEETRLLEEKREQLKKSKEQEKLLEQELEIFRQEEKKKEKMITLQKETMASLQIQLDKAAAKEKQYLQTTVSKEVYEEVCRKSASCQDDLTQALEKDSAERPKRNDSRSPPNPLSLPKLNHSTSETNSLHRSLTQAQDRKIQLEEEVIAYEERMKKLNVELKKLQGFQQQSELEGQGGKPGSPSSLCATEQVQAFDKKLEDMSNQVLQWQKQHQSDLKMLAAKEEQLRAFQEEMRALRENLLADERERSAPKDTCTLHRENDQIMSNMEQWAKEQKIANEKLGNKLREQVKYITKLTGEKDHLHDVLVHLQKENTKLKNEIEEKKLKAGPSRVYTKALCPSKTDPTSRGKVYGTLGWRGITQAVSQRMDITKSVGMPHCSE*