Part of scaffold_3384 (Scaffold)

For more information consult the page for scaffold_3384 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ABT1 ENSTTRG00000002176 (Bottlenosed dolphin)

Gene Details

activator of basal transcription 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002041, Bottlenosed dolphin)

Protein Percentage 97.0%
cDNA percentage 97.88%
Ka/Ks Ratio 0.25857 (Ka = 0.0132, Ks = 0.0512)

ABT1 ENSBTAG00000010784 (Cow)

Gene Details

Activator of basal transcription 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014277, Cow)

Protein Percentage 92.54%
cDNA percentage 92.66%
Ka/Ks Ratio 0.17317 (Ka = 0.0372, Ks = 0.2149)

ABT1  (Minke Whale)

Gene Details

activator of basal transcription 1

External Links

Gene match (Identifier: BACU007799, Minke Whale)

Protein Percentage 98.88%
cDNA percentage 98.51%
Ka/Ks Ratio 0.11438 (Ka = 0.0051, Ks = 0.0447)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 807 bp    Location:751..1557   Strand:+
>bmy_21909
AAGGGAGCCGCTGAGCTGGAACCTCTGGAAGGGAGTGACCAGAAATCAGAGGCAGAGGAGGAACAGGAGGAATCCGAAGAGGCGGCTGGCGGCAGCAAGAAACGGGTAGTGCCAGGTATTGTGTACCTGGGCCACATACCGCCCCGCTTTAGGCCTTTGCACGTACGGAACCTTCTCAGCGCCTACGGCGAGGTCGGGCGCGTTTTTTTCCAGCCGGAAGACGGGTTCGTGAGGCGCAAGAAGAAGGCAGCGGCAGCCCCCGCTGCGGGAGGAAAAAAGCGGTCCAAGTACAGCAAGGACTACACGGAGGGCTGGGTGGAGTTCCGGGACAAGCGAGTAGCCAAGCGTGTGGCTGCCAGTCTTCACAACACGCCCATGGGCTCCCGCAGGCGCAGCCCCTTCCGTTATGACCTGTGGAACCTCAGGTACCTGCACCGTTTTACCTGGTCCCACCTCAGCGAGCATCTTGCTTTTGAGCGCCAGGTACGCAGGCAGCGCCTGAGGGCTGAGGTTGCCCAGGCCAAGCGTGAGACTGACTTTTATCTTCGAAGCGTGGAGCGGGGACAGCGTTTCCTTGCCGCTGATGGGGACTCTACCCGCCCGAACGGCTCCTGGGCCTTTGCCCAGCGTCCTACTGAGCAGGAGCTGAGGGCCCGGAAGGCAGCTCGGCCAGGAGGACGTGAACGGGCTCGCCTGGCTAACGCTCAGGACCAGGCCCGCTCCAACAGAGGGCTTCTGGCCAAGATCTTTGGATCTGCCACCCCCTCAGAGAGCATGGAGGACTCCTCACTGGTCAGGAACTCTTGA

Related Sequences

bmy_21909T0 Protein

Length: 269 aa      View alignments
>bmy_21909T0
KGAAELEPLEGSDQKSEAEEEQEESEEAAGGSKKRVVPGIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQPEDGFVRRKKKAAAAPAAGGKKRSKYSKDYTEGWVEFRDKRVAKRVAASLHNTPMGSRRRSPFRYDLWNLRYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLRSVERGQRFLAADGDSTRPNGSWAFAQRPTEQELRARKAARPGGRERARLANAQDQARSNRGLLAKIFGSATPSESMEDSSLVRNS*