Sequence details bmy_21912 (Coding sequence)

Part of scaffold_3363 (Scaffold)

For more information consult the page for scaffold_3363 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRCC1 ENSTTRG00000002156 (Bottlenosed dolphin)

Gene Details

leucine rich repeat and coiled-coil centrosomal protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002024, Bottlenosed dolphin)

Protein Percentage 95.52%
cDNA percentage 97.94%
Ka/Ks Ratio 1.17316 (Ka = 0.022, Ks = 0.0188)

LRRCC1 ENSBTAG00000003338 (Cow)

Gene Details

leucine-rich repeat and coiled-coil domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004335, Cow)

Protein Percentage 91.06%
cDNA percentage 92.89%
Ka/Ks Ratio 0.21409 (Ka = 0.0432, Ks = 0.2016)

LRRCC1  (Minke Whale)

Gene Details

leucine rich repeat and coiled-coil centrosomal protein 1

External Links

Gene match (Identifier: BACU008396, Minke Whale)

Protein Percentage 95.37%
cDNA percentage 96.62%
Ka/Ks Ratio 0.51797 (Ka = 0.0302, Ks = 0.0583)

Additional orthologs identified in other species via the OPTIC pipeline.

LRRCC1 (Human)   Lrrcc1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3216 bp    Location:95274..59960   Strand:-
Raw sequence 
>bmy_21912
TGGCTTTGCGACACCGTCGGGGCGGGAAAGTGCCGGCTGTCGGTTGGAGGGAGGGTCCTCGGCTACCCCCTAGGGCCGGACTTCCGCGCACCCGGGAGGCGTATTCCGGCCTTTCCGACCCACCGCTGGGCGCGGGTTAAGACCCAGCTCCGCGTCGCCGGTGCCATGGAGGCGCCGGTGGAGGCGGAAGTCGAGAATGAAGACGGCGAGAGCAGCTGCGGGGATCTGTGCTTCATGGACAAAGGCCTGCGGAGCATATCAGAGTTATCCTTAGATTCAGCCCTTCATGCCATCAATCTTCATTGCAATAACATCACGAAGATCAAAGCCATTGATCACATTTGGAATTTACAACATTTAGATCTGTCATCTAATCAAATAAGTCAAATTGAAGGGCTAAACACACTGACAAAACTACGTACTTTAAACTTGTCCTGCAATTTGATCACAAGAATAGAAGGACTTGAAGCACTAACTAATCTGACTAGACTGAATTTATCTTATAACCACATAAATGATCTTAGTGGTTTGATGCCCCTTCATGGAATTAAACATAAACTTAGATATATTGACCTACATAGTAATTGTATAGATAGTATCCATCACCTACTTCAGTGTACGGTAGGATTGCACTTCTTGACTAATCTTATTTTGGAGAAAAATGGAGAAGATAATCCTGTCTGTCATTTACCAGGGTACAGAGCAGTTATGCTCCAGACTTTGACACAGCTTAGAATCCTAGATTGTAAGAACATATTTGGTGAACCAGTAAATATGGCAGAAATAAACTCATCACGCCTACAGTGCTTTGAAGGTCTTTTGGATAATTTAGTTTCTTCTGACTCTCCCCTAAATATAAGTGAAGATGAGATCATTGACGGTATGCCAGTGGTAACACCACCTATCGATGAGGTAGCTCCCTTGGATCACTTTGCAAGTACACCAGCAGATACTGGTTTGACATCCTTTATATCTGTGTGTCCTTCTTCTGAGCCAGAGAAAGTTAAGAATGAAAGTGATTTTCAGAATGAGATGAAACTTCAGAAATTAGATGACCAAATTTTACAGCTTCTTAATGAAACTTCTAATTCTTTAATAGATAATGTTCCTGAGAAAGATCTCAGACCAAAAAGAGACACAGATGTGACTTCTGAAAGTGACTGTGGAAACAGAAAAGAATGCAATAGAAAAATTCCTCGAAGATCAAAAATCCCATATTATTCCAAAACTATTCAAACTATTAAGCACCACAGTAAAAACAACAATGCTTTTATAAGTTGTAATCGTAAAATGAAACAACCTTTCTTTAAAGAATTACACGTAAGATCGTCTTTAGTGAACAATAATGTATTAGAAGAATCAGAAAAGCAGAAGACTGAAATAATTAAAGTAAACAGCGGTAGCTCAGAAAATGCCACTTACCGGAGATGGAAAGCTGAACAAACTGAAAAGAAACTTATGGATTATATTGATGAACTGCATAAACATGCAAATGAAAAAAAAGGTATTCATAGCCTGGCTCTTCTTACTACAGATAGGCTAAAGGAAATTATTTTTAAAGAGAGAAATTCCAAACTACAACTCGAAATTATGGTTCACAGACTTCAAAATGAAATTAAAAAACTAACTATTGAATTAATTAAAGCAAGAGATCAACAAGAGGATCACATTAGACACTTAAGAACCCTGGAAAAAGCATTAGAAAAAAAGGAGAGGCAAAAAGGGCAACAGCAAGCAGCACAGATGCAACTTATCCAAGAGGTGGAACTCAAAGCCGCAGCTGCTGATAGAGAAATAAACTTACTTAAAACTTCTCTTCATCAAGAAAAGGAACAGGTGCAACAACTTCATGAACTTCTTGCATTGAAAGAACAAGAACACAGGAAAGACCTTGAAACAAGGGAGTTTTTTAGTGAAGCTGAGTTCCAGGAAGCCTTAGCTAAAGAAATTGCTAAAGAAGAGAGAAAACATGAACAAGTTATAAAAGAATACCAAGACAAAATTGATGCATTAAACCAACAGTATATGGATTTAGAAAATGAATTCCGTATTGCTTTAACTGTTGAAGCCAGAAGATTTAAAGATGTTAAAGATGGTTTTGAAAATGTTGCAACTGAATTAGCAAAGAGCAAGCATGCTCTTGTTTGGGCTCAACGAAAAGAAAATGAATCTTCCTCTTTAATTAAAGATCTAACCAGTATGGTGAAGGAACAAAAAACAAAACTTGCAGAAGTTTCTAAATTGAAACAGGAAACAGCGACAAATTTACAGAATCAAATCAACACACTTGAAATTTTAATTGAAGATGACAAGCAGAAGAGTATTCAAATAGAACTTCTCAAGCATGAAAAAATGCAGCTTATTTCCGAACTAGCAGCCAAGGAATCGCTAATTTATGGTTTAAGGACAGAAAGAAAAGTATGGGGACATGAGTTGGCACAACAGGGATCTTCTCTAGCCCAAAATCATGGGAGACTAGAGGCTCAAATTGAAAGTTTGTGTAGGGAGAATGAATCTCTGCGAAAGGCAAGTGAACGTGATAATGACACATTAAGAATTAAGTGCAAAATCGTAGAAGACCAAACTGAAACCATTGGAAAATTAAAAGAATGTTTACAGGAAAGAGAGGAACAAATCAAAATATTGCACGAAAAGATCACTGAAATACAAAAATGTACCCAAGAACAACTTGATGAAAAATCTTCACAACTGGATGAAATAATTGAGAAATTAGAAAGACACAATGAAAGAAAAGAAAAACTAAAACAGCAGTTGAAAGTAAAGGAATTAGAACTCGAAGAAATTAGAAAAGCTTACAGTACACTTAATCAGAAGTGGCATGATAAAGGAGAGCTTCTGTGTCATCTTGAAATGCAAGTAAAAGAAGTGAAAGAAAACTTTGAAAACAAAGAAAGGAAACTTAAAGCAGAAAGAGACAAAAGTATTGAACTGCAAAAGGATGCAATAGAAAAGCTTCATAGTATGGATGATGCCTTTAAAAAACAAGTTGATGCAATTGTTGAAGCTCATCAAGCTGAAATAATACAGCTGGCAAGTGAAAAGCAGAAATGTATTGATTCTGCAAATTTAAAGGTTCATCGAGTTGAAGAAGAAATGCGTGGACTTCTGGAAGAAACATGCAAGAACAAAAAAGCAATGGAAATAAAAATTAAGCAACTTGCTTTTGCTCTAAATCAAATTCAGCAAGAAATGTGA

Related Sequences

bmy_21912T0 Protein

Length: 1072 aa      View alignments
>bmy_21912T0
WLCDTVGAGKCRLSVGGRVLGYPLGPDFRAPGRRIPAFPTHRWARVKTQLRVAGAMEAPVEAEVENEDGESSCGDLCFMDKGLRSISELSLDSALHAINLHCNNITKIKAIDHIWNLQHLDLSSNQISQIEGLNTLTKLRTLNLSCNLITRIEGLEALTNLTRLNLSYNHINDLSGLMPLHGIKHKLRYIDLHSNCIDSIHHLLQCTVGLHFLTNLILEKNGEDNPVCHLPGYRAVMLQTLTQLRILDCKNIFGEPVNMAEINSSRLQCFEGLLDNLVSSDSPLNISEDEIIDGMPVVTPPIDEVAPLDHFASTPADTGLTSFISVCPSSEPEKVKNESDFQNEMKLQKLDDQILQLLNETSNSLIDNVPEKDLRPKRDTDVTSESDCGNRKECNRKIPRRSKIPYYSKTIQTIKHHSKNNNAFISCNRKMKQPFFKELHVRSSLVNNNVLEESEKQKTEIIKVNSGSSENATYRRWKAEQTEKKLMDYIDELHKHANEKKGIHSLALLTTDRLKEIIFKERNSKLQLEIMVHRLQNEIKKLTIELIKARDQQEDHIRHLRTLEKALEKKERQKGQQQAAQMQLIQEVELKAAAADREINLLKTSLHQEKEQVQQLHELLALKEQEHRKDLETREFFSEAEFQEALAKEIAKEERKHEQVIKEYQDKIDALNQQYMDLENEFRIALTVEARRFKDVKDGFENVATELAKSKHALVWAQRKENESSSLIKDLTSMVKEQKTKLAEVSKLKQETATNLQNQINTLEILIEDDKQKSIQIELLKHEKMQLISELAAKESLIYGLRTERKVWGHELAQQGSSLAQNHGRLEAQIESLCRENESLRKASERDNDTLRIKCKIVEDQTETIGKLKECLQEREEQIKILHEKITEIQKCTQEQLDEKSSQLDEIIEKLERHNERKEKLKQQLKVKELELEEIRKAYSTLNQKWHDKGELLCHLEMQVKEVKENFENKERKLKAERDKSIELQKDAIEKLHSMDDAFKKQVDAIVEAHQAEIIQLASEKQKCIDSANLKVHRVEEEMRGLLEETCKNKKAMEIKIKQLAFALNQIQQEM*