Sequence detailsbmy_21935 (Coding sequence)

Part of scaffold_3426 (SequenceType object (1))

For more information consult the page for scaffold_3426 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ST6GALNAC1ENSBTAG00000001998 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000034579, Cow)

Protein Percentage 78.77%
cDNA percentage 86.16%
Ka/Ks Ratio 0.3457 (Ka = 0.113, Ks = 0.3269)

ST6GALNAC1 (Minke Whale)

Gene Details

ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1

External Links

Gene match (Identifier: BACU011547, Minke Whale)

Protein Percentage 96.28%
cDNA percentage 97.45%
Ka/Ks Ratio 0.5453 (Ka = 0.0219, Ks = 0.0401)

Additional orthologs identified in other species via the OPTIC pipeline.

ST6GALNAC1 (Human)   St6galnac1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1611 bp    Location:4690..1018   Strand:-
Raw sequence 
>bmy_21935
AATCAGCATCGAGAGAACATTAAGGAAAGGTCTCCGGAGTTGCTGCAAAAGGCTACGTCCCAGGCACCCACTACCGGAAGCAGGACGACCGCCCACGTGGAGTCAGCACAGGGGACCAGCATGCAGGACACACCCCACGAGGCCACAGCCAACACAGCTGGAGAGGGCAGAGGAGTGGAGGCTGGCAAGGCCAGTGCCGAGGAGCCAGGCAGAGCACCCAGCACAGCCAGGATGGCAGCACCGGAGACACAGGCGAGCAAGGACACCGCGGGGGACACGCTGCCCCCGAGAGCTCAAGTCGGGGGGGTGGCCTCTGGCTGGACGGAGGCACCGTCGCTGAACAGTCAGGACCCGAGGACAACCAAAGGGTCAGGGGACCAGAGCGCGAGGCCGACGGCCCCAAGGATGGTGCCCACGAAGCTGCAGGGCAACGCAGCAGCTACAGCAAGGACGCCCCTTCCAGAAAATCAGGCTGGGGTGCAGACCCCTGCGGGAGCGGGGCCAACAGGAAGGGGAGTCCGAGGAGCCACCACAGAGGCTGTCCCACCCAAGGACAGAGCCCAGGCCACCCCGTCCTCAGCCCCTCTCCAGAGCCCCACCACCCAGAGAGGCCAGAGATTGAGGGCCGCCAACTTCAAGTCTGAGCCGCAGTGGGATTTTGAGGAAGAATACAGCCTGGAGGTGAGCGGCCTCCAGACGAATCTCTTTCTGCCCAACCTCACCCTCTTCCTGGACTCCAGACACTTCAACCAGAGCGAGTGGGGTCGCCTGGAGCACTTCGCTCCGCCCTTCGGCTTCATGGAGCTCAACTTCTCCTTGGTGCAGAAGGTCGTGCCCTGCTTCCCCCCGGTGCCCAAGCAGCAGCTGCTCCTGGCCAGCCTCCCTGCTGGGAGCTCCCAGTGCATCAGCTGTGCCGTGGTGGGCAACGGGGGCATCCTGAACAACTCCCAAGTGGGCCCAGAGATAGACGGCCATGACTACGTGTTCCGACTGAGTGGAGCTGTCATTAAGGGCTACGAACAGGATGTGGGTACTCGGACGTCCTTCTATGGCTTTACTGCCTTCTCCCTGACCCAGTCACTCCTTATACTGGGCAATCGGGGTTTCCGGCATGTGCCTCTGGGAAAGGATGTCCGCTACCTGCACTTCCTGGAAGGCACCCGGGACTATGAGTGGCTGGAAGCACTGCTTCTGAATCAGACCCTGGTGACGAAGAACCTCTTCTGGTTCAGGCGCAGGCCCCAGGAAGCTTTCCGGGAAGGCTTGCAATTGGACAGATACCTGTTGCTGCACCCAGACTTGCTCCGATACATGAAGTACAGATTCCTGAGGTCTAAGACTCTGAACACCGTCCACTGGCAAATATACCGGCCCACCACTGGGGCCCTCCTGCTGCTTACTGCCCTTCAGCTCTGTGACCAGGTGAGTGCCTATGGCTTCATCACCAAGGGCCACGAACACTTCTCTGACCACTACTATGATAAGTCATGGAAACGAACGATCTTTTACACCAACCATGACTTCAAGTTGGAGAGAACGCTCTGGAAGCGGCTCCATGATGAAGGTATTATCCAACTCTACCAACATCCTGTAACTGCCAAACCAACCATG

Related Sequences

bmy_21935T0 SequenceType object (3)

Length: 537 aa      View alignments
>bmy_21935T0
NQHRENIKERSPELLQKATSQAPTTGSRTTAHVESAQGTSMQDTPHEATANTAGEGRGVEAGKASAEEPGRAPSTARMAAPETQASKDTAGDTLPPRAQVGGVASGWTEAPSLNSQDPRTTKGSGDQSARPTAPRMVPTKLQGNAAATARTPLPENQAGVQTPAGAGPTGRGVRGATTEAVPPKDRAQATPSSAPLQSPTTQRGQRLRAANFKSEPQWDFEEEYSLEVSGLQTNLFLPNLTLFLDSRHFNQSEWGRLEHFAPPFGFMELNFSLVQKVVPCFPPVPKQQLLLASLPAGSSQCISCAVVGNGGILNNSQVGPEIDGHDYVFRLSGAVIKGYEQDVGTRTSFYGFTAFSLTQSLLILGNRGFRHVPLGKDVRYLHFLEGTRDYEWLEALLLNQTLVTKNLFWFRRRPQEAFREGLQLDRYLLLHPDLLRYMKYRFLRSKTLNTVHWQIYRPTTGALLLLTALQLCDQVSAYGFITKGHEHFSDHYYDKSWKRTIFYTNHDFKLERTLWKRLHDEGIIQLYQHPVTAKPTM