Part of scaffold_3427 (Scaffold)

For more information consult the page for scaffold_3427 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LAMP5 ENSTTRG00000013961 (Bottlenosed dolphin)

Gene Details

lysosomal-associated membrane protein family, member 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013238, Bottlenosed dolphin)

Protein Percentage 91.79%
cDNA percentage 92.38%
Ka/Ks Ratio 0.26391 (Ka = 0.0109, Ks = 0.0414)

LAMP5 ENSBTAG00000007977 (Cow)

Gene Details

Lysosome-associated membrane glycoprotein 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010487, Cow)

Protein Percentage 95.0%
cDNA percentage 94.05%
Ka/Ks Ratio 0.14905 (Ka = 0.025, Ks = 0.1675)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1053 bp    Location:61055..73329   Strand:+
>bmy_21950
AGCACACGCGCGTTCACCCTGCCCGGGTCGGTGCGGTACTCCATCCACACCAAGTCCGCCAGCGCGTACGGAACACGCGCTCCCTCCCTCCTCCCTCTCGGTGCCCCCGCCCCTCTCTCACTCCGGCTCACTCCAGCGGCGACTTTGAGGGATTCCCTCTCGGGCGGCCTCTGCAGCAGCACCACTGGCCTTATTCGCTGCTCCGCGAGGATGGGTCTCCGAGGAAGAGCCTTTCTCGGCGTGAATAGACTTCGAGTTCTTCTGATGCTTTTCCATACAATGGCTCGAATCATGGCAGAACAAGAAGTGGAGAATCTCTCAGGCCTTTCCACTAATCCTGAAAAAGATATATTTGTGGTGCGGGAAAATGGGACGACGTGTCTCATGGCAGAGTTTGCAGCCAAATTTATTGTCCCTTATGATGTGTGGGCCAGCAATTATGTAGATCTAATCACGGAACAGGCTGATATCTCACTGACCCGGGGAGCTGAGGTGAAGGGCCGCTGTGGCCACAACGAGTCGGAGCTGCAGGTGTTCTGGGTGGATCGCGCGTACGCGCTCAAAATGCTGTTTGTAAAGGAAAGTCACAACACGTCCAAGGGACCCGAGACGACGTGGAGGCTGAGCAAGGTCCAGTTTGTCTATGACTCCTCGGAGAAGACCCATTTTAAAGACGCGGTCAGTGCCGGGAAGCACACAGCCAACTCGCATCATCTCTCTGCCTTGGTCACCCCAGCTGGAAAGTCCTATGAATGTCAAGCTCAGCAGACCATTTCACTAGCCTCCAGTGATCCGCAGAAGACAGTCACCATGATCCTGTCTGCGGTCCACATCCAGCCCTTTGACATCATCTCTGATTTTGTCTTCAGTGAAGAGCATAAATGCCCAGTGGATGAGCGGGAGCAGTTGGAGGAAACCTTGCCTCTGATTTTGGGGCTCATCTTGGGCCTCGTCATTGTGGTAACACTGGTGATTTACCATCTCCACCACAAAATGACTGCCAACCAGGTCCAGATCCCTAGGGACCGATCCCAATATAAGCACATGGGCTAG

Related Sequences

bmy_21950T0 Protein

Length: 351 aa      View alignments
>bmy_21950T0
STRAFTLPGSVRYSIHTKSASAYGTRAPSLLPLGAPAPLSLRLTPAATLRDSLSGGLCSSTTGLIRCSARMGLRGRAFLGVNRLRVLLMLFHTMARIMAEQEVENLSGLSTNPEKDIFVVRENGTTCLMAEFAAKFIVPYDVWASNYVDLITEQADISLTRGAEVKGRCGHNESELQVFWVDRAYALKMLFVKESHNTSKGPETTWRLSKVQFVYDSSEKTHFKDAVSAGKHTANSHHLSALVTPAGKSYECQAQQTISLASSDPQKTVTMILSAVHIQPFDIISDFVFSEEHKCPVDEREQLEETLPLILGLILGLVIVVTLVIYHLHHKMTANQVQIPRDRSQYKHMG*