Part of scaffold_3424 (Scaffold)

For more information consult the page for scaffold_3424 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATP6V0A4 ENSTTRG00000012381 (Bottlenosed dolphin)

Gene Details

ATPase, H+ transporting, lysosomal V0 subunit a4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011748, Bottlenosed dolphin)

Protein Percentage 96.45%
cDNA percentage 97.38%
Ka/Ks Ratio 0.40184 (Ka = 0.0191, Ks = 0.0476)

ATP6V0A4 ENSBTAG00000004263 (Cow)

Gene Details

V-type proton ATPase 116 kDa subunit a isoform 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005588, Cow)

Protein Percentage 91.41%
cDNA percentage 92.77%
Ka/Ks Ratio 0.27583 (Ka = 0.0468, Ks = 0.1698)

ATP6V0A4  (Minke Whale)

Gene Details

ATPase, H+ transporting, lysosomal V0 subunit a4

External Links

Gene match (Identifier: BACU006755, Minke Whale)

Protein Percentage 87.92%
cDNA percentage 89.45%
Ka/Ks Ratio 0.54207 (Ka = 0.0982, Ks = 0.1811)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2421 bp    Location:36966..84447   Strand:+
>bmy_21955
ATGGCCGAGGGCACAGGTGGGGCGGGGAGAGGGAGGGGGTTTGAGCAGGACCGGCCGGCGGGGCAGGTTTGTCCTCGCCCCGGACAGGTCGGTGTTGGTACAACAGAGCCGCCTCCCGGCCTCTGCGGGCGCCCGGGGAGGAGAAGCCGCAGGAGGGGCTCGGCCGTCGCCGCAGGGAGGTCGCCTGCGGAGTCCCCGGCCGGGCTGGTCCCATCCGGCCCGCCGCTCGCCAGCCCGACACACCCGGCCCGGCCGCTGCGGCCCGCGCTGCCTGCTCGGGGTCCRGCGAAGGAAGCCGCTGGAGACCCGCGCCCAGGACCTGCTCGGACAAGGCTGGACCAAGGCTGGGTCAAGATGGCGTCCGTATTCCGAAGTGAGGAGATGTGTTTGTCACAGCTCTTCCTCCAGGTTGAGGCTGCATATTGCTGTGTAGCTGAGCTTGGAGAGCTTGGATTGGTTCAGTTCAAAGACTTAAATGTGAACGAGAGCCGCTTCCAAAGGAAATTTGTGAATGAAGTCAGAAGGTGTGAATCGCTGGAGAGAATCCTCCGTTTTCTGGAAGATCAGATGCAAAATGAGATTGAGATTCAGGTGCCTGAGAAGTCCCCGTCGACCCCTCTCCCACGGGAAATGATTACCCTGGAGACTGCTCTAGAAAAACTGGAAGGAGAGTTACAGGAAGCCAATCAGAACTATCAGGCTTTGAAGAAAAGCTTCCTAGAGCTGACTGAATTCAAACATCTCCTGAAGAAAACCCAGGACTTCTTTGAGGTTACGGAAACCAATTTAGCTGATGATTTCTTTATGGAAGACACTTCTGGTCTCCTGGAGTTCACGGCTGGTGTGGTCAACCGGGAGAGGATGGCTTCCTTTGAGAGGCTGCTGTGGCGAATTTGCCGAGGAAACATCTACTTAAAGTTCAGTGAGATGGACACAGTTCTGGAAGATCCCATTACAAGAGAAGAAATTAAAAAGAATATATTCATCATATTTTATCAAGGAGAGCAGCTCAGGCAGAAAATCAAGAAGATTTGTGATGGGTTTCGAGCCACCACATACCCCTGCCCAGAGCCGGCGTCGGAGCGCAGAGAGATGCTGGATGGTGTCAACATGAGGCTGGAAGATTTAATCACCGTCATAACACAGACGGAGTCTCACCGTCAGCGCCTCCTGCAAGAAGCAGCTGCCAACTGGCACTCCTGGGTCATCAAAGTGCACAAGATGAAGGCCATTTACCACATTCTGAACATGTGCAACATCGACGTCACCCAGCAGACCAATAAATTCACAGCTGGCTTCCAGAATATTGTAGATGCATATGGTGTAGGCAGTTACCGGGAGATGAACCCAGCTCCCTACACCATCATCACTTTCCCCTTCCTGTTCGCTGTGATGTTTGGAGACTGTGGTCACGGAATTGTGATGCTACTGGCAGCCCTTTGGATGGTCCTTAATGAGAGACGCTTGCTGTCCCAGAAGACGACCAATGAGATTTGGAACACCTTCTTCCACGGGCGCTACCTCCTCCTCCTCATGGGCATCTTCTCCATCTACACGGGCTTGATTTACAACGACTGCTTCTCCAAGTCTTTCAACATCTTTGGTTCTTCTTGGAGCGTCCAACCCATGTTCAGAAATGGCACATGGAATACACAAGTAATGGAAACAAATCCACATTTACAGCTGGACCCAGCCGTTCCGGGAGTGTACTCTGGAAATCCATACCCTTTTGGGATTGATCCGATTTGGAACTTGGCTTCAAACAAGCTAACATTCTTGAACTCCTATAAGATGAAGATGTCAGTTATCCTGGGAATTGTCCAGATGGTTTTTGGTGTCATTCTCAGCCTTTTCAATCACATATTCTTCAGAAACACTCTCAACATCATTCTGCAGTTCATCCCTGAGATGATTTTTATCCTGTGTCTTTTTGGATACCTGGTTTTCATGATCATTTTCAAATGGTGCTCCTTCGACGTCTCTGTGTCCCGGCGAGCCCCAAGCATCCTCATCCACTTCATCAACATGTTCCTGTTTAACTATAATGACCCTTCGAACGCACCCCTCTACAAACATCAGCAAGAAGTCCAAAGCTTCTTTGTTATTATGGCTTTGATTTCTGTGCCGTGGATGCTTCTGATTAAGCCGTTTATTCTTAGAGCCAGTCATCAGAAATCCCAGTTCAACTTTGGAGACATCTTTGTGCATCAGGCCATCCACACGATTGAGTACTGCCTGGGCTGCATTTCCAACACAGCCTCCTACCTCCGGCTCTGGGCCCTCAGCCTGGCGCATGCACAACTGTCTGAAGTGCTCTGGACCATGGTGATGAACATTGGCCTTCGCGTGCAAGGCTGGGGAGGACTCATTGGGGTCTTCATCATTTTTGCCATATTTGCTGTTCTGACGCCATCCTTCTGA

Related Sequences

bmy_21955T0 Protein

Length: 807 aa      View alignments
>bmy_21955T0
MAEGTGGAGRGRGFEQDRPAGQVCPRPGQVGVGTTEPPPGLCGRPGRRSRRRGSAVAAGRSPAESPAGLVPSGPPLASPTHPARPLRPALPARGPAKEAAGDPRPGPARTRLDQGWVKMASVFRSEEMCLSQLFLQVEAAYCCVAELGELGLVQFKDLNVNESRFQRKFVNEVRRCESLERILRFLEDQMQNEIEIQVPEKSPSTPLPREMITLETALEKLEGELQEANQNYQALKKSFLELTEFKHLLKKTQDFFEVTETNLADDFFMEDTSGLLEFTAGVVNRERMASFERLLWRICRGNIYLKFSEMDTVLEDPITREEIKKNIFIIFYQGEQLRQKIKKICDGFRATTYPCPEPASERREMLDGVNMRLEDLITVITQTESHRQRLLQEAAANWHSWVIKVHKMKAIYHILNMCNIDVTQQTNKFTAGFQNIVDAYGVGSYREMNPAPYTIITFPFLFAVMFGDCGHGIVMLLAALWMVLNERRLLSQKTTNEIWNTFFHGRYLLLLMGIFSIYTGLIYNDCFSKSFNIFGSSWSVQPMFRNGTWNTQVMETNPHLQLDPAVPGVYSGNPYPFGIDPIWNLASNKLTFLNSYKMKMSVILGIVQMVFGVILSLFNHIFFRNTLNIILQFIPEMIFILCLFGYLVFMIIFKWCSFDVSVSRRAPSILIHFINMFLFNYNDPSNAPLYKHQQEVQSFFVIMALISVPWMLLIKPFILRASHQKSQFNFGDIFVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVMNIGLRVQGWGGLIGVFIIFAIFAVLTPSF*