Part of scaffold_3417 (Scaffold)

For more information consult the page for scaffold_3417 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCDHA12 ENSTTRG00000001821 (Bottlenosed dolphin)

Gene Details

protocadherin alpha 12

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001713, Bottlenosed dolphin)

Protein Percentage 81.82%
cDNA percentage 82.66%
Ka/Ks Ratio 0.18983 (Ka = 0.1164, Ks = 0.6133)

PCDHA11 ENSBTAG00000048170 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020511, Cow)

Protein Percentage 91.96%
cDNA percentage 91.79%
Ka/Ks Ratio 0.16851 (Ka = 0.0406, Ks = 0.2411)

Genome Location

Sequence Coding sequence

Length: 2448 bp    Location:36183..33736   Strand:-
>bmy_21960
ATGTATGCAATGTTCGCGTCTGAAAGAAGGGGATTGGACACTGGGCGACTGCTGCTGTCGCTTCTGCTTCTCGCAGCCTGGGAGGCGGGCAGCGGCCAGGTCTACTACTCCATTCCCGAGGAGGCAAAACACGGCACCTTCGTGGGCCGCATAGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCCGCGTCTGTTCCGGGTRGCRTCCAAAGGCCGCGGGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATCGACCGGGAGGAGCTGTGCGGGCGGAGTGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGATAGGCCGCTGCAGGTGTTTCATGTGGAGGTGGAAGTAAAGGATATTAACGATAATCCACCGGTGTTCTCTCTCAGAGAACAAAAGCTGCTGATTTCTGAATCTAAGCAACCTGACTCTCATTTTCCTCTAGAGGGAGCTTCTGATGCGGATATAGGAGAGAATGCTCAATTGACCTATAGACTAAGTCAAAATGAGCACTTTTCTTTAGAATTACCAACAAATAGTAAGCAGACTAAAAGGCTGTCACTTACATTAAAGAAGTCTCTGGACAGAGAGAAAACTCCGGAACTTAATTTACTATTAACGGCTGCAGACGGCGGGAAACCGGAGCTCACTGGCACTGTTCATCTCTTCGTCCGCGTCTTGGACATTAACGACAATGATCCGGAATTTGAACAATCAGAATACAAGGTGAGATTGATGGAAAACGCAGCTAAAGAAACTCCTGTGATAACGTTAAACGCCACAGATCAAGATGAAGGAGTCAACGGGGAGGTGACATACTCCTTGATGTCGATTAAGCCCAGTGGAAAAGGTTTATTTACACTGCATGAAAATAGTGGAGAAGTAAGAGTCAATGGAACTTTAGACTATGAAGAAAACAAGTTTTATGAAATTGACGTACAGGCTACAGATAAGGGGAATCCCCCAATGGCAGGTCACTGTACAGTCTGGGTCGAAATCTTAGATGCCAATGATAACGCCCCTGAAGTCACTGTGACGTCCCTGTCTCTTCCAGTGCGGGAGGACACTCAGCCAAGCACGGTCATTGCGCTGATCAGTGTATCTGATCGCGACTCTGGTGCCAACGGACAGGTGATCTGTTCTCTAACGCCCAGCGTCCCCTTCAAGATCGTGTCCACGTTCAAGAACTATTACTCACTAGTGCTGGACAGCGCCCTGGACCGCGAGAGCGTGTCTGTCTATAAATTGGTGGTTACAGCGCGGGACGGGGGCTCGCCTTCGCTGTCGGCCACAGCCAGCGTGTCCGTGGAGGTGGCCGACGTGAACGACAACGCGCCCGCGTTCDCSCAGCCCGAGTACACGGTGYTSGTGAAGGAGAACAACCCGCCCGGCTGCCACATCTTCACGGTGTCGGCGCGGGACGCGGACGCGCAGGAGAACGCGCTGGTGTCCTACTCGCTGGTGGAGCGGCGGGTGGGCGAGCGAGCGCTGTCGAGCTACGTGTCGGTGCACGCGGAGAGCGGCAAGGTGTACGCGCTGCAGCCGCTGGACCACGAGGAGCTGGAGCTGCTGCAGTTCCAGGTGAGCGCGCGCGACGCGGGCGTGCCGCCTCTGGGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCCGCGCTGCTGCTGCCCGGGCCGGGCGGCGGGGCGGGCGCTCTGAGCCAGCTGGTGGCTCGGTCGGTGGGCGCGGGCCACGTGGTGGCGAAGGTGCGCGCGGTGGACGCGGACTCGGGCTACAACGCGTGGCTGTCGTACGAGCTGCAGCCGGCGGCGGGTGGCGCGCGCAGCCCGTTCCGCGTGGGGCTGTACACGGGCGAGATCAGCACGACGCGCGCCCTGGACGAGGCGGACGCGCCGCGCCAGCGCCTGCTGGTGCTGGTGAAGGACCACGGCGAGCCGGCGCTGACGGCCACGGCCACCGTGCTGCTGTCGCTGGAGGACAGCGGCCAGGCGCCCAAGGCCTCTTCGCGGGCGTCGACGGGCGCCGCCGGCGCGGAGGCCGCTCTGGTGGATGTGAACGTGTACCTGATCATCGCCATCTGCGCGGTGTCCAGCCTGTTGGTGCTCACGCTGCTGCTGTACACGGCGCTGCGGTGCTCGGCGCCGCCCAGCGAGGGCGCGTGCGGGCCCGGGAAGCCCACGCTGGTGTGCTCCAGCGCGGTGGGGAGCTGGTCTTACTCGCAGCAGAGGCGGCAGCGGGTGTGCTCTGGGGAGGGGCCGCCCAAGGCAGACCTCATGGCCTTCAGCCCCAGCCTTCCTCCGGGTCTGGATAGAGAAGTCGGAGAGGAAAAGCAGGAGGCAGGATCAAATCACCCTGGGCAGGTGAGTTCTATAGATTCCCACCTTTTGAAGTCGATGTTAAATTTTTAA

Related Sequences

bmy_21960T0 Protein

Length: 816 aa      View alignments
>bmy_21960T0
MYAMFASERRGLDTGRLLLSLLLLAAWEAGSGQVYYSIPEEAKHGTFVGRIAQDLGLELAELVPRLFRVASKGRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVEVEVKDINDNPPVFSLREQKLLISESKQPDSHFPLEGASDADIGENAQLTYRLSQNEHFSLELPTNSKQTKRLSLTLKKSLDREKTPELNLLLTAADGGKPELTGTVHLFVRVLDINDNDPEFEQSEYKVRLMENAAKETPVITLNATDQDEGVNGEVTYSLMSIKPSGKGLFTLHENSGEVRVNGTLDYEENKFYEIDVQATDKGNPPMAGHCTVWVEILDANDNAPEVTVTSLSLPVREDTQPSTVIALISVSDRDSGANGQVICSLTPSVPFKIVSTFKNYYSLVLDSALDRESVSVYKLVVTARDGGSPSLSATASVSVEVADVNDNAPAFXQPEYTVXVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLLPGPGGGAGALSQLVARSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAGGARSPFRVGLYTGEISTTRALDEADAPRQRLLVLVKDHGEPALTATATVLLSLEDSGQAPKASSRASTGAAGAEAALVDVNVYLIIAICAVSSLLVLTLLLYTALRCSAPPSEGACGPGKPTLVCSSAVGSWSYSQQRRQRVCSGEGPPKADLMAFSPSLPPGLDREVGEEKQEAGSNHPGQVSSIDSHLLKSMLNF*