Part of scaffold_3417 (SequenceType object (1))

For more information consult the page for scaffold_3417 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCDHA12ENSTTRG00000001821 (Bottlenosed dolphin)

Gene Details

protocadherin alpha 12

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001713, Bottlenosed dolphin)

Protein Percentage 81.82%
cDNA percentage 82.66%
Ka/Ks Ratio 0.18983 (Ka = 0.1164, Ks = 0.6133)

PCDHA11ENSBTAG00000048170 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020511, Cow)

Protein Percentage 91.96%
cDNA percentage 91.79%
Ka/Ks Ratio 0.16851 (Ka = 0.0406, Ks = 0.2411)

Genome Location

Sequence SequenceType object (2)

Length: 2448 bp    Location:36183..33736   Strand:-
>bmy_21960
ATGTATGCAATGTTCGCGTCTGAAAGAAGGGGATTGGACACTGGGCGACTGCTGCTGTCGCTTCTGCTTCTCGCAGCCTGGGAGGCGGGCAGCGGCCAGGTCTACTACTCCATTCCCGAGGAGGCAAAACACGGCACCTTCGTGGGCCGCATAGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCCGCGTCTGTTCCGGGTRGCRTCCAAAGGCCGCGGGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATCGACCGGGAGGAGCTGTGCGGGCGGAGTGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGATAGGCCGCTGCAGGTGTTTCATGTGGAGGTGGAAGTAAAGGATATTAACGATAATCCACCGGTGTTCTCTCTCAGAGAACAAAAGCTGCTGATTTCTGAATCTAAGCAACCTGACTCTCATTTTCCTCTAGAGGGAGCTTCTGATGCGGATATAGGAGAGAATGCTCAATTGACCTATAGACTAAGTCAAAATGAGCACTTTTCTTTAGAATTACCAACAAATAGTAAGCAGACTAAAAGGCTGTCACTTACATTAAAGAAGTCTCTGGACAGAGAGAAAACTCCGGAACTTAATTTACTATTAACGGCTGCAGACGGCGGGAAACCGGAGCTCACTGGCACTGTTCATCTCTTCGTCCGCGTCTTGGACATTAACGACAATGATCCGGAATTTGAACAATCAGAATACAAGGTGAGATTGATGGAAAACGCAGCTAAAGAAACTCCTGTGATAACGTTAAACGCCACAGATCAAGATGAAGGAGTCAACGGGGAGGTGACATACTCCTTGATGTCGATTAAGCCCAGTGGAAAAGGTTTATTTACACTGCATGAAAATAGTGGAGAAGTAAGAGTCAATGGAACTTTAGACTATGAAGAAAACAAGTTTTATGAAATTGACGTACAGGCTACAGATAAGGGGAATCCCCCAATGGCAGGTCACTGTACAGTCTGGGTCGAAATCTTAGATGCCAATGATAACGCCCCTGAAGTCACTGTGACGTCCCTGTCTCTTCCAGTGCGGGAGGACACTCAGCCAAGCACGGTCATTGCGCTGATCAGTGTATCTGATCGCGACTCTGGTGCCAACGGACAGGTGATCTGTTCTCTAACGCCCAGCGTCCCCTTCAAGATCGTGTCCACGTTCAAGAACTATTACTCACTAGTGCTGGACAGCGCCCTGGACCGCGAGAGCGTGTCTGTCTATAAATTGGTGGTTACAGCGCGGGACGGGGGCTCGCCTTCGCTGTCGGCCACAGCCAGCGTGTCCGTGGAGGTGGCCGACGTGAACGACAACGCGCCCGCGTTCDCSCAGCCCGAGTACACGGTGYTSGTGAAGGAGAACAACCCGCCCGGCTGCCACATCTTCACGGTGTCGGCGCGGGACGCGGACGCGCAGGAGAACGCGCTGGTGTCCTACTCGCTGGTGGAGCGGCGGGTGGGCGAGCGAGCGCTGTCGAGCTACGTGTCGGTGCACGCGGAGAGCGGCAAGGTGTACGCGCTGCAGCCGCTGGACCACGAGGAGCTGGAGCTGCTGCAGTTCCAGGTGAGCGCGCGCGACGCGGGCGTGCCGCCTCTGGGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCCGCGCTGCTGCTGCCCGGGCCGGGCGGCGGGGCGGGCGCTCTGAGCCAGCTGGTGGCTCGGTCGGTGGGCGCGGGCCACGTGGTGGCGAAGGTGCGCGCGGTGGACGCGGACTCGGGCTACAACGCGTGGCTGTCGTACGAGCTGCAGCCGGCGGCGGGTGGCGCGCGCAGCCCGTTCCGCGTGGGGCTGTACACGGGCGAGATCAGCACGACGCGCGCCCTGGACGAGGCGGACGCGCCGCGCCAGCGCCTGCTGGTGCTGGTGAAGGACCACGGCGAGCCGGCGCTGACGGCCACGGCCACCGTGCTGCTGTCGCTGGAGGACAGCGGCCAGGCGCCCAAGGCCTCTTCGCGGGCGTCGACGGGCGCCGCCGGCGCGGAGGCCGCTCTGGTGGATGTGAACGTGTACCTGATCATCGCCATCTGCGCGGTGTCCAGCCTGTTGGTGCTCACGCTGCTGCTGTACACGGCGCTGCGGTGCTCGGCGCCGCCCAGCGAGGGCGCGTGCGGGCCCGGGAAGCCCACGCTGGTGTGCTCCAGCGCGGTGGGGAGCTGGTCTTACTCGCAGCAGAGGCGGCAGCGGGTGTGCTCTGGGGAGGGGCCGCCCAAGGCAGACCTCATGGCCTTCAGCCCCAGCCTTCCTCCGGGTCTGGATAGAGAAGTCGGAGAGGAAAAGCAGGAGGCAGGATCAAATCACCCTGGGCAGGTGAGTTCTATAGATTCCCACCTTTTGAAGTCGATGTTAAATTTTTAA

Related Sequences

bmy_21960T0 SequenceType object (3)

Length: 816 aa      View alignments
>bmy_21960T0
MYAMFASERRGLDTGRLLLSLLLLAAWEAGSGQVYYSIPEEAKHGTFVGRIAQDLGLELAELVPRLFRVASKGRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVEVEVKDINDNPPVFSLREQKLLISESKQPDSHFPLEGASDADIGENAQLTYRLSQNEHFSLELPTNSKQTKRLSLTLKKSLDREKTPELNLLLTAADGGKPELTGTVHLFVRVLDINDNDPEFEQSEYKVRLMENAAKETPVITLNATDQDEGVNGEVTYSLMSIKPSGKGLFTLHENSGEVRVNGTLDYEENKFYEIDVQATDKGNPPMAGHCTVWVEILDANDNAPEVTVTSLSLPVREDTQPSTVIALISVSDRDSGANGQVICSLTPSVPFKIVSTFKNYYSLVLDSALDRESVSVYKLVVTARDGGSPSLSATASVSVEVADVNDNAPAFXQPEYTVXVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLLPGPGGGAGALSQLVARSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAGGARSPFRVGLYTGEISTTRALDEADAPRQRLLVLVKDHGEPALTATATVLLSLEDSGQAPKASSRASTGAAGAEAALVDVNVYLIIAICAVSSLLVLTLLLYTALRCSAPPSEGACGPGKPTLVCSSAVGSWSYSQQRRQRVCSGEGPPKADLMAFSPSLPPGLDREVGEEKQEAGSNHPGQVSSIDSHLLKSMLNF*