Part of scaffold_3434 (Scaffold)

For more information consult the page for scaffold_3434 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSEN34 ENSTTRG00000006571 (Bottlenosed dolphin)

Gene Details

tRNA splicing endonuclease 34 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006217, Bottlenosed dolphin)

Protein Percentage 99.61%
cDNA percentage 98.58%
Ka/Ks Ratio 0.04044 (Ka = 0.0019, Ks = 0.0462)

TSEN34 ENSBTAG00000006486 (Cow)

Gene Details

tRNA-splicing endonuclease subunit Sen34

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008501, Cow)

Protein Percentage 96.53%
cDNA percentage 92.92%
Ka/Ks Ratio 0.07605 (Ka = 0.0188, Ks = 0.2468)

TSEN34  (Minke Whale)

Gene Details

TSEN34 tRNA splicing endonuclease subunit

External Links

Gene match (Identifier: BACU009070, Minke Whale)

Protein Percentage 98.8%
cDNA percentage 99.2%
Ka/Ks Ratio 0.33464 (Ka = 0.0054, Ks = 0.0162)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 846 bp    Location:42345..37545   Strand:-
>bmy_21964
ATGCCCGAAGAAGCGCGGCTGCTGGCCGAGATCGGCGCGGTGACCCTAGTCAGCGCCCCGCGCCCGGATCCCCGCCAACACAGCCTGGCATTGGCATCCTTCAAGCGCCAGCAAGAGCAGGGCTTCCAGGAGCAAAGTGCTCTGGCAGCTGAGGCCCGTGAGACCCGTCGTCAGGAGCTCCTAGAGAAGATTGCAGAGGGCCAGGCTGCGAAGAAGCAGAAGCTGGAACAGAAATCAGGGACCAGCGGGAGCCAGGAGGCCGGTGGGAACCAAGCTGCAGAAGAGAACGAGGCCAGTGCTGGCCAGGCTGCTGGAGAGCATGAGGAAGCAGGTGAAGGCTCCTCCTCTCCCCAGCCAGGACCTTCAAATGGGGTGGCTCCTTTGCCCAGGTCTGCTCTGCTCATCCAGCTGGCCACTGCTAGGCCTCGGCCCATCAAGGCTAGGCCCCTGGACTGGCGTGTCCAGTCCAAAGACTGGCCCCACGCTGGCCGTCCTGCCCACGAGCTTCGCTACAGCATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGGGGCGACTTCCTGGTCTATCCCGCCTCTGAAACCGTGGAAGGACAGGAAACACTTGGGAACCCGTGCTCATTTGAAGGGCAGTTTAGCGACCCGCTCCGTTTCCACGCTCACTACATCGCTCAGTGCTGGGCTCCCGGGGACCCCATCCCACTCCAGGACCTGGTTTCTGCTGGCCGCCTCGGCACCAGTGTCAGAAAGACACTGCTGCTTTGCTCTCCGCAGCCTGATGGTAAGGTGGTCTACACATCCCTGCAGTGGGCCAGCCTGCAGTGA

Related Sequences

bmy_21964T0 Protein

Length: 282 aa      View alignments
>bmy_21964T0
MPEEARLLAEIGAVTLVSAPRPDPRQHSLALASFKRQQEQGFQEQSALAAEARETRRQELLEKIAEGQAAKKQKLEQKSGTSGSQEAGGNQAAEENEASAGQAAGEHEEAGEGSSSPQPGPSNGVAPLPRSALLIQLATARPRPIKARPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAGKFGGDFLVYPASETVEGQETLGNPCSFEGQFSDPLRFHAHYIAQCWAPGDPIPLQDLVSAGRLGTSVRKTLLLCSPQPDGKVVYTSLQWASLQ*