Part of scaffold_3434 (Scaffold)

For more information consult the page for scaffold_3434 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CNOT3 ENSTTRG00000006567 (Bottlenosed dolphin)

Gene Details

CCR4-NOT transcription complex, subunit 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006213, Bottlenosed dolphin)

Protein Percentage 78.53%
cDNA percentage 77.94%
Ka/Ks Ratio 0.04006 (Ka = 0.002, Ks = 0.0492)

CNOT3 ENSBTAG00000014900 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019836, Cow)

Protein Percentage 95.95%
cDNA percentage 91.9%
Ka/Ks Ratio 0.04162 (Ka = 0.0211, Ks = 0.5074)

CNOT3  (Minke Whale)

Gene Details

CCR4-NOT transcription complex, subunit 3

External Links

Gene match (Identifier: BACU009073, Minke Whale)

Protein Percentage 99.63%
cDNA percentage 99.14%
Ka/Ks Ratio 0.0382 (Ka = 0.0015, Ks = 0.0402)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1947 bp    Location:92373..67337   Strand:-
>bmy_21967
ATGGCGGACAAGCGCAAACTCCAAGGTGAGATTGACCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGATCTAAAGAAGGAGATTAAGAAGCTTCAACGGCTGAGGGACCAGATCAAGACTTGGGTAGCATCCAATGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGCAAATGGAACGGTTCAAAGTTGTGGAGCGAGAGACCAAGACCAAAGCCTATAGCAAGGAGGGCCTGGGCCTGGCACAGAAGGTGGACCCTGCCCAGAAGGAAAAGGAGGAGGTCGGCCAGTGGCTCACGAATACCATCGACACCCTAAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCGGTGCAAACACGCAAGAAGAAGGGCGACAAGGATCAGAAGCAGGACCGGATCGAGGGCCTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTGGAGACCATCCTGCGCATGCTGGACAACGACTCCATCCTCGTGGACGCCATCCGCAAGATCAAGGACGACGTCGAGTACTACGTGGACTCGTCCCAGGACCCCGACTTCGAGGAGAACGAGTTCCTCTACGACGACCTGGACCTCGAGGACATCCCACAGGCGCTGGTCGCCACCTCCCCGCCCAGCCACAGTCACATGGAGGATGAGATCTTCAACCAGTCAAGCAGCACGCCCACCTCGACCACCTCCAGCTCGCCCATCCCGCCCAGCCCGGCCAACTGCACCACGGAAAACTCTGAAGATGACAAGAAGAGGGGACGCTCGACAGATAGTGAAATCAGCCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAGCCAGCACCCTCAGTCCCCAGCAGTGCCGCCAAGCTACCCCTCCGGCCCCCCGCCCGCCGCCTCTGCCCTGAGCACCGCCCCTGGCAACAACGGGGCCCCCGCCCCGGCAGCACCCCCAAGCGCCCTGGGCGCCAAGGCCAGCCCAGCTCCCAGCCACAACTCGGGCACGCCCGCCCCCTACGCCCAGGCTGTGGCCCCGCCAGCTCCCAGTGGGCCCAGCCCCGCGCAGCCCCGGCCCCCCAGCGTGCAGCCCGGCGGCGGCGGCGGAGGCGGAGGCAAGCAGAACGGCGCCACCAGTTACAGCTCAGTAGTGGCAGACAGCCCGGCAGAGGTGGCTCTCAGCAGCGGCGGGGGCAGCAGTGCCAACAGCCAGGCCCTGGGCCCCCCGTCTGGCCCCCACAACCCACCTCCCAGCACCTCGAAGGAACCCAATGCGACAGCCCCAACGGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCGGGGGGACCCAGTCTCCTGGTGCCACTACCTGTGAACCCTCCCAGCTCCCCGACACCCAGCTTCAGCGAGGCCAAGGCGGCCGGCGCCCTGCTCAATGGACCTCCACAGTTCAGCGCTGCCCCGGAGATCAAGGCCCCTGAGCCCCTGAGCTCTTTGAAGTCCATGGCGGAGCGGGCAGCCATCAGCTCCGGCATCGAGGACCCCGTCCCCACGCTGCACCTGACTGAGCGAGGTGAGCATCCGGGGGTGGGGCGGGCCGTCCAGGAGGGGCTGGACGCACCAGCCTCACCGCTCGCCGGCCCCACCTCTGCCCTCCCCGCAGACATCATCCTGAGCAGCACGTCAGCTCCCCCGGCCTCGGCCCAGCCGGCCCTGCAGCTGTCGGAGGTGAACATACCGCTGTCGCTGGGTGTGTGTCCCCTGGGGCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCAGACTCTGAGCGTATCCGGTGA

Related Sequences

bmy_21967T0 Protein

Length: 649 aa      View alignments
>bmy_21967T0
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKEKEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYHVRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEISQSPAKNGSKPVHSSQHPQSPAVPPSYPSGPPPAASALSTAPGNNGAPAPAAPPSALGAKASPAPSHNSGTPAPYAQAVAPPAPSGPSPAQPRPPSVQPGGGGGGGGKQNGATSYSSVVADSPAEVALSSGGGSSANSQALGPPSGPHNPPPSTSKEPNATAPTGAGGVAPGSGNNSGGPSLLVPLPVNPPSSPTPSFSEAKAAGALLNGPPQFSAAPEIKAPEPLSSLKSMAERAAISSGIEDPVPTLHLTERGEHPGVGRAVQEGLDAPASPLAGPTSALPADIILSSTSAPPASAQPALQLSEVNIPLSLGVCPLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIR*