Sequence detailsbmy_21967 (Coding sequence)

Part of scaffold_3434 (SequenceType object (1))

For more information consult the page for scaffold_3434 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CNOT3ENSTTRG00000006567 (Bottlenosed dolphin)

Gene Details

CCR4-NOT transcription complex, subunit 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006213, Bottlenosed dolphin)

Protein Percentage 78.53%
cDNA percentage 77.94%
Ka/Ks Ratio 0.04006 (Ka = 0.002, Ks = 0.0492)

CNOT3ENSBTAG00000014900 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019836, Cow)

Protein Percentage 95.95%
cDNA percentage 91.9%
Ka/Ks Ratio 0.04162 (Ka = 0.0211, Ks = 0.5074)

CNOT3 (Minke Whale)

Gene Details

CCR4-NOT transcription complex, subunit 3

External Links

Gene match (Identifier: BACU009073, Minke Whale)

Protein Percentage 99.63%
cDNA percentage 99.14%
Ka/Ks Ratio 0.0382 (Ka = 0.0015, Ks = 0.0402)

Additional orthologs identified in other species via the OPTIC pipeline.

CNOT3 (Human)   Cnot3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1947 bp    Location:92373..67337   Strand:-
Raw sequence 
>bmy_21967
ATGGCGGACAAGCGCAAACTCCAAGGTGAGATTGACCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGATCTAAAGAAGGAGATTAAGAAGCTTCAACGGCTGAGGGACCAGATCAAGACTTGGGTAGCATCCAATGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGCAAATGGAACGGTTCAAAGTTGTGGAGCGAGAGACCAAGACCAAAGCCTATAGCAAGGAGGGCCTGGGCCTGGCACAGAAGGTGGACCCTGCCCAGAAGGAAAAGGAGGAGGTCGGCCAGTGGCTCACGAATACCATCGACACCCTAAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCGGTGCAAACACGCAAGAAGAAGGGCGACAAGGATCAGAAGCAGGACCGGATCGAGGGCCTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTGGAGACCATCCTGCGCATGCTGGACAACGACTCCATCCTCGTGGACGCCATCCGCAAGATCAAGGACGACGTCGAGTACTACGTGGACTCGTCCCAGGACCCCGACTTCGAGGAGAACGAGTTCCTCTACGACGACCTGGACCTCGAGGACATCCCACAGGCGCTGGTCGCCACCTCCCCGCCCAGCCACAGTCACATGGAGGATGAGATCTTCAACCAGTCAAGCAGCACGCCCACCTCGACCACCTCCAGCTCGCCCATCCCGCCCAGCCCGGCCAACTGCACCACGGAAAACTCTGAAGATGACAAGAAGAGGGGACGCTCGACAGATAGTGAAATCAGCCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAGCCAGCACCCTCAGTCCCCAGCAGTGCCGCCAAGCTACCCCTCCGGCCCCCCGCCCGCCGCCTCTGCCCTGAGCACCGCCCCTGGCAACAACGGGGCCCCCGCCCCGGCAGCACCCCCAAGCGCCCTGGGCGCCAAGGCCAGCCCAGCTCCCAGCCACAACTCGGGCACGCCCGCCCCCTACGCCCAGGCTGTGGCCCCGCCAGCTCCCAGTGGGCCCAGCCCCGCGCAGCCCCGGCCCCCCAGCGTGCAGCCCGGCGGCGGCGGCGGAGGCGGAGGCAAGCAGAACGGCGCCACCAGTTACAGCTCAGTAGTGGCAGACAGCCCGGCAGAGGTGGCTCTCAGCAGCGGCGGGGGCAGCAGTGCCAACAGCCAGGCCCTGGGCCCCCCGTCTGGCCCCCACAACCCACCTCCCAGCACCTCGAAGGAACCCAATGCGACAGCCCCAACGGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCGGGGGGACCCAGTCTCCTGGTGCCACTACCTGTGAACCCTCCCAGCTCCCCGACACCCAGCTTCAGCGAGGCCAAGGCGGCCGGCGCCCTGCTCAATGGACCTCCACAGTTCAGCGCTGCCCCGGAGATCAAGGCCCCTGAGCCCCTGAGCTCTTTGAAGTCCATGGCGGAGCGGGCAGCCATCAGCTCCGGCATCGAGGACCCCGTCCCCACGCTGCACCTGACTGAGCGAGGTGAGCATCCGGGGGTGGGGCGGGCCGTCCAGGAGGGGCTGGACGCACCAGCCTCACCGCTCGCCGGCCCCACCTCTGCCCTCCCCGCAGACATCATCCTGAGCAGCACGTCAGCTCCCCCGGCCTCGGCCCAGCCGGCCCTGCAGCTGTCGGAGGTGAACATACCGCTGTCGCTGGGTGTGTGTCCCCTGGGGCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCAGACTCTGAGCGTATCCGGTGA

Related Sequences

bmy_21967T0 SequenceType object (3)

Length: 649 aa      View alignments
>bmy_21967T0
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKEKEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYHVRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEISQSPAKNGSKPVHSSQHPQSPAVPPSYPSGPPPAASALSTAPGNNGAPAPAAPPSALGAKASPAPSHNSGTPAPYAQAVAPPAPSGPSPAQPRPPSVQPGGGGGGGGKQNGATSYSSVVADSPAEVALSSGGGSSANSQALGPPSGPHNPPPSTSKEPNATAPTGAGGVAPGSGNNSGGPSLLVPLPVNPPSSPTPSFSEAKAAGALLNGPPQFSAAPEIKAPEPLSSLKSMAERAAISSGIEDPVPTLHLTERGEHPGVGRAVQEGLDAPASPLAGPTSALPADIILSSTSAPPASAQPALQLSEVNIPLSLGVCPLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIR*