Sequence details bmy_21978 (Coding sequence)

Part of scaffold_3428 (Scaffold)

For more information consult the page for scaffold_3428 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEC31B ENSTTRG00000004171 (Bottlenosed dolphin)

Gene Details

SEC31 homolog B (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003927, Bottlenosed dolphin)

Protein Percentage 75.78%
cDNA percentage 79.78%
Ka/Ks Ratio 0.81923 (Ka = 0.077, Ks = 0.094)

SEC31B ENSBTAG00000000090 (Cow)

Gene Details

protein transport protein Sec31B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000099, Cow)

Protein Percentage 83.55%
cDNA percentage 88.54%
Ka/Ks Ratio 0.56102 (Ka = 0.104, Ks = 0.1854)

SEC31B  (Minke Whale)

Gene Details

SEC31 homolog B (S. cerevisiae)

External Links

Gene match (Identifier: BACU012398, Minke Whale)

Protein Percentage 93.66%
cDNA percentage 94.88%
Ka/Ks Ratio 0.62549 (Ka = 0.0457, Ks = 0.0731)

Additional orthologs identified in other species via the OPTIC pipeline.

SEC31B (Human)   Sec31b (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3174 bp    Location:75444..42907   Strand:-
Raw sequence 
>bmy_21978
ATGAAGCTGAAGGAACTTGAGCGGCCAGCCGTACAAGTGTGGAGCCCAGCTAGCCAGTACCCTGTGTATCTGGCCACAGGAACATCTGCCCAGCAGCTAGATGCCTCCTTTAGTACAGATGGCACATTGGAAATCTTTGAGGTTGATTTCAGGGACCCCTCTCTGGACTTGAAACGCAAGGGAGTCCTTTCTGCCTCCAGCAGGTTCCACAAGCTGATCTGGGGGAGCTTTGGCAACGGGGTTCTGGAAGGCTCCGGGGTTATTGCAGGCGGCGGGGACGATGGCATGCTTACGCTATACAATGTGACCCACATCCTGTCTTCGGGAAAGGAGCCTGTGATTACCCAGATACAGAAGCACACGGGGGCTGTCAGAGCCCTTGACTTTAATCCTTTCCAGGGCAACCTCCTGGCCTCAGGGGCCAATGATTCTGAACTCTTCATTTGGGATTTGAATAACCTGAGTGTGCCAATGACCCCAGGATCCAAGTCACAGTCTGTAACTGGGCCCATCTTTTTCTTCCTCGCTTTTGTTTCTTATGCYTACAGTATCGTGAGGAGTGACAGGTTGTCCTCAACCTGCCCCCCACACATCCTGCCTCAGCAGCCCCCAGAAGACATCAAGGCACTCTCTTGGAACTGTCAAGTTCAACACATTCTGTCTTCTGCTCACCCCAGCGGCAAGGCAGTCGTGTGGGATCTCAGGAAGAATGAACCTATCATCAAAGTCAGTGATCACAGTAACAGGATGCACTGCTCAGGCCTGGCCTGGCACCCAGACATAGCCACCCAGTTGGTGCTATGTTCAGAAGATGATCGTCTTCCAGTAATTCATCTGTGGGACTTGCGCTTTGCCTCCTCACCCCTGAAGGTGCTGGAGAGTCACAGCAGGGGGATCCTGTCAGTGTCATGGAGTCAGGCTGATGATGAGCTACTGCTCAGTAGTGCCAAGGACAACCAGATCTTGTGCTGGAACCTGGGGAGCAGTGAGGTGGTGTATAAGCTACCCACACTGAGCAGCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGACCCTCCAGTGTTCTCTGCTGCCTCCTTCGACGGCTGGATCAGTTTATACTCTGTGATGGGTAGGAGCTGGGAAGTCCAGCAGATGAGACAGGCTGACAAGGTCCTTTGGAGCAGCGGGCAGCTTCTTCACACTGTCTGTTCAGGAAGCCACTTAGTGGCTGGGGGGATGGGCCTTGTGGAACAGTTACACGGGACACTGGAAGTCTTTGAAGGTGTTGTGGRGTGTGGCCACAAACTCCTAGCTGGAGGAGCCCACCTCTGGGGATGTCAGTTTGGGGGGAAGCTGGTTACCTTTGGCCTCCCCAGCACCCCTGCCCATCAGGTGCCACAGCCTTGCCTCYGCCTAGTCTTCATCAGTCAGGTCACCACAGAAYCTGAATTCCTCATGCGGTCAGCTGAGCTGCAGGAGGGCCTGGGATCAGGAAATCTCCTGAATTACTGTCAGAACAAGATCCAGCAAGCATCACYGCAAAGCGAAAAGATGCTCTGGCAGTTCCTGAAGGTGACCTTAGAGAAGGACTCCAGAATGAAATTCCTAAAACTATTAGGATACAATAAAGATGAACTTCAGAAGAAGGTGGCCACATGGTTGAAGAGTGATTTGGGGCTGGGTGAGAGCCCTCAGCCCAAGGGAGTTGACCTCAACAGTAACAGACAACAGGCCTTTTGCATCCAGACCTCCAAACATACCACCAAGGAAGCCTCTGCCTGCTCAACCTTCTTTGATGAGCTGGTCCCTCAGGACATGACTCCGTGGGAGATCCCCATCACAGAAGACACAGGCGGACTCCTGAGCCAGGCTCTCCTGCTTGGAGAACTGGGCCCCGCTGTGGAGCTGTGTCTGAAGGAAGAGTGCTTTGCTGATGCCATCATCCTGGCCCAGGCTGGGGGCGCAGATCTGCTGAAGCAAACACAGGAGCACTACTTGGCCAAGAAGAAGACCAGAATTGCCCCGCTGCTAGCCTGTGTTATACAGAAGAATTGGAAAGATATGGTGTGTGCCTGTAGCCTGAAGAACTGGAGAGAGGCTCTGGCCTTGCTACTGACATACTCAGGGCCAGAGAAATTCCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAGCAGGAGGGTGGCAGGGCACTAACCTCTGAAGCCAGACTCTGTTACGTGTGCTCAGGAAGTGTGGAGCGGCTGGTGGAGTGCTGGGAAAAATGCCCCCGGGCTTCATCCCCCATGGCTCTACAGGACCTGATGGAGAAGGTGATGGTCCTTAACAAGAGCTTGAAGCTGCTGCGGGGTCCTGATGGGGTTCCAGCTCCATCTCCAAGGACAAGGATTTTTACACCTCCGTCATCACTTGTGATGCCCTTGACACCTTCYCGTCCTAGTCCTTATCAGGGCTCCAGAATGCAGAATACAAGTGACTACAGGCCATCTGGGTTCCAGGAAGCCCAGTCTTTGCCTGTGGTCCCTGGGGTAAGGCCTGCTTTATCTCAGCCGCAGCTATCAGGAGGGCAAAGGATGCAAGCTCCTAACCCCATGGGATTCCCTGGAACATGGCCTCTTCCTGGTCCACCCACGGCACCCCCAGACATTATGCAGGCTGGTTCTGCCTCCCTGCCTGAGACTCCTCGACGGCTCCCTCTGCTTCCTGTGAGAGCACCAGGCTTCAACCCTATGAGCTCCCAGCCGCCAGCCCCTCCTGTCACCTTCTCTGCAGCACACCCTCCAGGAGGGCCAGGTGCTCCATGCGCCGATGCCTTCCCGACCACTGGCATCTTGACTCCTCAACCAGTTGCCAGAGACATTTATGCCCCCAGCACCAATTACTGCTCCAGTTATCAACTGCAGCGGCCACCTGAGAAGATGGACAGGAAGGAGCTGCCCCCTGAACATCAGTCCTTGAAGATCAGCCTTGAGGCGCTTCTGCAGCGCTGCTCCCTCTGTGCCACTGATGTACTCTCGCCTCCTGTTCTGGCTGGGCTCCACGAGGTTGCCCGATGTGTGGACGCAGGAAGCTTTGAGCGGGGCCTCGCCGTGCATGCTCAGGTGGTGAGCTGCAGCAGCTTCAGCGAGGTCTCCAGCTTCATGCCTGTCCTGAAGTCCGTCCTCACCATCGCTCATAAGCTACACATCTAG

Related Sequences

bmy_21978T0 Protein

Length: 1058 aa      View alignments
>bmy_21978T0
MKLKELERPAVQVWSPASQYPVYLATGTSAQQLDASFSTDGTLEIFEVDFRDPSLDLKRKGVLSASSRFHKLIWGSFGNGVLEGSGVIAGGGDDGMLTLYNVTHILSSGKEPVITQIQKHTGAVRALDFNPFQGNLLASGANDSELFIWDLNNLSVPMTPGSKSQSVTGPIFFFLAFVSYAYSIVRSDRLSSTCPPHILPQQPPEDIKALSWNCQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDIATQLVLCSEDDRLPVIHLWDLRFASSPLKVLESHSRGILSVSWSQADDELLLSSAKDNQILCWNLGSSEVVYKLPTLSSWCFDVQWCPRDPPVFSAASFDGWISLYSVMGRSWEVQQMRQADKVLWSSGQLLHTVCSGSHLVAGGMGLVEQLHGTLEVFEGVVXCGHKLLAGGAHLWGCQFGGKLVTFGLPSTPAHQVPQPCLXLVFISQVTTEXEFLMRSAELQEGLGSGNLLNYCQNKIQQASXQSEKMLWQFLKVTLEKDSRMKFLKLLGYNKDELQKKVATWLKSDLGLGESPQPKGVDLNSNRQQAFCIQTSKHTTKEASACSTFFDELVPQDMTPWEIPITEDTGGLLSQALLLGELGPAVELCLKEECFADAIILAQAGGADLLKQTQEHYLAKKKTRIAPLLACVIQKNWKDMVCACSLKNWREALALLLTYSGPEKFPELCDMLGTRMEQEGGRALTSEARLCYVCSGSVERLVECWEKCPRASSPMALQDLMEKVMVLNKSLKLLRGPDGVPAPSPRTRIFTPPSSLVMPLTPSRPSPYQGSRMQNTSDYRPSGFQEAQSLPVVPGVRPALSQPQLSGGQRMQAPNPMGFPGTWPLPGPPTAPPDIMQAGSASLPETPRRLPLLPVRAPGFNPMSSQPPAPPVTFSAAHPPGGPGAPCADAFPTTGILTPQPVARDIYAPSTNYCSSYQLQRPPEKMDRKELPPEHQSLKISLEALLQRCSLCATDVLSPPVLAGLHEVARCVDAGSFERGLAVHAQVVSCSSFSEVSSFMPVLKSVLTIAHKLHI*