Part of scaffold_3432 (Scaffold)

For more information consult the page for scaffold_3432 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BCO2 ENSTTRG00000010525 (Bottlenosed dolphin)

Gene Details

beta-carotene oxygenase 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009984, Bottlenosed dolphin)

Protein Percentage 98.15%
cDNA percentage 98.61%
Ka/Ks Ratio 0.35729 (Ka = 0.0096, Ks = 0.027)

BT.64006 ENSBTAG00000034193 (Cow)

Gene Details

beta,beta-carotene 9',10'-oxygenase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000045443, Cow)

Protein Percentage 84.76%
cDNA percentage 88.22%
Ka/Ks Ratio 0.45881 (Ka = 0.1045, Ks = 0.2279)

BCO2  (Minke Whale)

Gene Details

beta-carotene oxygenase 2

External Links

Gene match (Identifier: BACU009594, Minke Whale)

Protein Percentage 99.08%
cDNA percentage 99.15%
Ka/Ks Ratio 0.31772 (Ka = 0.0054, Ks = 0.0171)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1302 bp    Location:109143..86851   Strand:-
>bmy_21989
ATGGCTTTACTTCACCAGTTCAAGGTGGAGAAGGGCACAGTGACATACAGGAGCAAGTTTCTACAGAGTGATACATATAAGGCCAACAGTGTTCATGATCGAATTGTGATCTCAGAATTTGGCACATTGGCTCTCCCTGATCCATGCAAGAATGTTTTTGAACGTTTCATGTCAAAATTTGAACCGCCTGCAATTACTGACAACACCAATGTCAACTATGTGCAGTACAAGGGTGATTACTACATTAGTACGGAAACCAACTTCATGAATAAAGTGGACATCGAAACCCTGGAAAAAACAGAAAAGGTAGACTGGAGCAAATTTATTGCTGTGAATGGAGCAACTGCACATCCTCATTATGACAAAGATGGAACAGCATACAACATGGGGAACTCCTATGGGCAACATGGTTCTTGCTATAATGTTATTCGGGTTCCTCCGGAGAAGGTAGACCTTGGGGAGACAATCCATGGAGCCCAGGTGATATGTTCTATTGCTTCTGCAGAGAGGATGAAACCTTCTTACTACCACAGCTTTGGAATGACAAGGAACTACATTGTCTTCATTGAACAGCCTCTAAAGATGAATCTGTGGAAAATCATCACTTCTAAAATTCGGGGAAAGGCCTTTTCAGATGGAATAAGCTGGGAACCCCAGTATAATACACGGTTTCATGTGGTGGATAAGCACACTGGTCAGCTTCTTCCAGGGATGTACTACAGTAAACCTTTTGTTACTTTTCACCAAATCAATGCCTTTGAGGACCAGGGCTGTGTCGTAATTGATTTGTGCTGTCAGGATGATGGAAGAAGCCTAGAAGTTTACCAACTACAGAATCTTAGGAAAACTGGGAAAGAGCTTGATCAGGTCTATAATTCAGTAGCCAAATCTTTTCCTCGAAGGTTTGTTTTGCCCTTACATGTCAGTTTGAATGCCCCTGAGGGAGAGAACCTCAGCCCGTTGTCCTATTCTTCAGCCAGTGCTGTGAAACAGGCTGATGGAAAGATTTGGTGTTCTTATGAAAATCTATATCCTGAGGACCTAGAAGAGGAAGGAGGTGTTGAATTTCCCCAGATCAACTATGGCCAATTCAGTGGCAAAAAGTATCAGTTCTTCTATGGCTGTGGCTTTCGGCATTTGGTGGGCGATTCTCTGATCAAGGTTGACGTGGTGAACAAGACACTGATGAATGAAAGAAATTTCCTCCTAGTCTTGGATGCCAAGAACTTTGAAGAACTGGGCCGAGCAGAGGTGCCTGTGCAAATGCCTTACGGGTTCCATGGCACCTTCGTGACCATCTGA

Related Sequences

bmy_21989T0 Protein

Length: 434 aa      View alignments
>bmy_21989T0
MALLHQFKVEKGTVTYRSKFLQSDTYKANSVHDRIVISEFGTLALPDPCKNVFERFMSKFEPPAITDNTNVNYVQYKGDYYISTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDKDGTAYNMGNSYGQHGSCYNVIRVPPEKVDLGETIHGAQVICSIASAERMKPSYYHSFGMTRNYIVFIEQPLKMNLWKIITSKIRGKAFSDGISWEPQYNTRFHVVDKHTGQLLPGMYYSKPFVTFHQINAFEDQGCVVIDLCCQDDGRSLEVYQLQNLRKTGKELDQVYNSVAKSFPRRFVLPLHVSLNAPEGENLSPLSYSSASAVKQADGKIWCSYENLYPEDLEEEGGVEFPQINYGQFSGKKYQFFYGCGFRHLVGDSLIKVDVVNKTLMNERNFLLVLDAKNFEELGRAEVPVQMPYGFHGTFVTI*