Sequence detailsbmy_21993 (Coding sequence)

Part of scaffold_3451 (SequenceType object (1))

For more information consult the page for scaffold_3451 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTGDRENSTTRG00000005873 (Bottlenosed dolphin)

Gene Details

prostaglandin D2 receptor (DP)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005549, Bottlenosed dolphin)

Protein Percentage 79.5%
cDNA percentage 81.16%
Ka/Ks Ratio 0.41401 (Ka = 0.0224, Ks = 0.0541)

PTGDRENSBTAG00000006703 (Cow)

Gene Details

Prostaglandin D2 receptor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000008808, Cow)

Protein Percentage 88.64%
cDNA percentage 91.23%
Ka/Ks Ratio 0.21783 (Ka = 0.055, Ks = 0.2527)

PTGDR (Minke Whale)

Gene Details

prostaglandin D2 receptor (DP)

External Links

Gene match (Identifier: BACU015341, Minke Whale)

Protein Percentage 98.89%
cDNA percentage 98.8%
Ka/Ks Ratio 0.14274 (Ka = 0.0048, Ks = 0.0339)

Additional orthologs identified in other species via the OPTIC pipeline.

PTGDR (Human)   Ptgdr (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1086 bp    Location:102695..110209   Strand:+
Raw sequence 
>bmy_21993
ATGAGGCCGCTGTTCTACCGCTGCTGCAACACCACGTGGGTGGAGAAGGGAAACTCAGCGACGATGGGCGGGGTGCTCTTCAGCACGGGCCTCCTGGGCAACCTGCTAGCCCTGGGGCTGCTGGCGCGCTCGGGGCTGCGGTCGTGCCCGCGGCGCTCGCCGCGCCCGCCGCCCTCCGTCTTCTACGTGCTGGTGTGCGGCCTGACGGTCACCGACCTGCTGGGCAAGTCCCTCGTGAGCCCCTTCGTGCTGTTCGCCTACGCGCAGAACCGGAGCCTGAGGGGCCTGGTGCCCGCATCCGGCAGCTCACTGTGCCAAGCCTTCGCCTTCTTCATGTCCTTCTTCGGGCTTGCCTCGACGCTGCAGCTGCTGGCCATGGCCCTGGAGTGCTGGCTCTCCCTGGGGCATCCCTTCTTCTACCGACGGTACATCACCCCGCGCCGGGGCGCACTGGTGGCGCCTGTCGTGGGCGCCTTCTGCCTTGCTTTCTGCTCGCTGCCCTTCGCGGGCTTCGGGAAGTTCGTGCAGTACTGCCCCGGCACCTGGTGCTTCATCCAAATGGTCCACGAGGGGCGCTCGCTGTCGGTGCTGAGCTACTCAGTGCTCTACGCCAGCCTCATGCTGCTGCTGGTCCTCGCCATCGTGCTGTGCAACCTGAGCGCCATGCGCAACCTCTACGCGATGCACCTSCGGCTGCGGCGGCTCCCGCGCTCTGGCCCCAGGGAACGAGCGGAGCTGGCCGCCGGCGAGAGGGAAGAGACCCCGCCGCCCCTGGAGGAGCTGGATCACCTCCTGCTGTTAGCCCTCATGACTGTGCTCTTCACCATGTGCTCCCTGCCTTTAATTTATCGTGCTTACTATGGAGCGTTTAAAGCTGTTCACGAGAAAAATGGAACTGCTGAAGAAATTGAAGACCTCCGAGCCTTACGCTTTCTCTCTGTGATCTCCATTGTGGACCCTTGGCTTTTCATCATTTTCAGAACATCGGTATTTCGGATGTTTTTTCACAAGATTTTCATAAGGCCTCTTATGTATAGAAACTGGCAAAGCAATTTTTGCGGAACTAACATGGAATCCAGCCTGTGA

Related Sequences

bmy_21993T0 SequenceType object (3)

Length: 362 aa      View alignments
>bmy_21993T0
MRPLFYRCCNTTWVEKGNSATMGGVLFSTGLLGNLLALGLLARSGLRSCPRRSPRPPPSVFYVLVCGLTVTDLLGKSLVSPFVLFAYAQNRSLRGLVPASGSSLCQAFAFFMSFFGLASTLQLLAMALECWLSLGHPFFYRRYITPRRGALVAPVVGAFCLAFCSLPFAGFGKFVQYCPGTWCFIQMVHEGRSLSVLSYSVLYASLMLLLVLAIVLCNLSAMRNLYAMHLRLRRLPRSGPRERAELAAGEREETPPPLEELDHLLLLALMTVLFTMCSLPLIYRAYYGAFKAVHEKNGTAEEIEDLRALRFLSVISIVDPWLFIIFRTSVFRMFFHKIFIRPLMYRNWQSNFCGTNMESSL*