Sequence detailsbmy_22037 (Coding sequence)

Part of scaffold_3505 (SequenceType object (1))

For more information consult the page for scaffold_3505 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MED17ENSTTRG00000001141 (Bottlenosed dolphin)

Gene Details

mediator complex subunit 17

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001071, Bottlenosed dolphin)

Protein Percentage 88.48%
cDNA percentage 88.17%
Ka/Ks Ratio 0.05831 (Ka = 0.003, Ks = 0.0514)

MED17ENSBTAG00000003552 (Cow)

Gene Details

Mediator of RNA polymerase II transcription subunit 17

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004623, Cow)

Protein Percentage 98.62%
cDNA percentage 95.65%
Ka/Ks Ratio 0.03772 (Ka = 0.0064, Ks = 0.169)

Additional orthologs identified in other species via the OPTIC pipeline.

MED17 (Human)   Med17 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1956 bp    Location:103205..122469   Strand:+
Raw sequence 
>bmy_22037
ATGTCTGGGGTGCGCGCTGTGCGGATCAGCATTGAGTCTGCCTGCGAGAAGCAGGTCCAGGAGGTGGGCCTGGATGGCACTGAGACGTACCTGCAGCCGCTGTCCATGTCCCAGAATCTGGCGCGTCTGGCCCAGCGGATCGACTTCAGCCAGGGTTCGGGCTCCGAGGAGGAGGAGGCTGCGGGGGCAGATGGCGACACGCAGGACTGGGCGGGCGCCGGGTCCAGCGCGGACCAGGACGACGAGGAAGGGTTGGTGAAATTTCAACCTTCCCTTTGGCCTTGGGATTCAGTGAGGAACAATTTGAGAGGTGCCCTGACAGAGATGTGTGTTCTCTATGATGTTCTCAGTATTGTTAGGGATAAAAAATTTATGACTCTTGATCCCGTCTCTCAGGATGCACTTCCTCCAAAACAGAATCCTCAGACGTTGCAGTTGATATCTAAAAAGAAGTCACTTGCCGGAGCAGCACAAATCCTACTGAAGGGGGCAGAAAGACTGACTAAATCAGTCACTGAAAACCAAGAAAATAAGCTACAAAGAGACTTCAACTCTGAGCTTTTGAGACTGAGGCAACACTGGAAACTTAGAAAAGTTGGAGATAAAATTCTTGGAGATCTGAGCTACAGAAGTGCAGGATCTCTGTTTCCCCATCATGGTACATTTGAAGTAATAAAGAATACAGATATTGATCTAGACAAGAAAATACCTGAAGATTACTGTCCCCTTGATGTCCAGATTCCTAGTGATTTAGAGGGCTCTGCATATATCAAGGTTTCAATTCAAAAACAGTCTCCAGACATAGGTGATCTTGGCACAGTTAACCTCTTCAAACGACCTTTGCCTAAATCCAAACCAGGTTCCCCACATTGGCAGACAAAATTAGAAGCAGCACAAAATGTTCTCTTATGTAAAGAAATTTTTGCACAGCTCTCTCGGGAAGCTGTTCAAATTAAATCACAGATCCCTCACATTGTGGTGAAAAACCAGATTATCTCTCAGCCCTTTCCGAGCTTGCAGTTATCTATTTCTTTGTGCCATTCTTCAAATGATAAGAAATCCCAAAAATCTGCTACYGAGAAGCAAAGTCCAGAGGACCATCTTTATGTCCTAGAGCATAATTTGCATCTACTGATTAGAGAGTTTCATAAACAGACCTTGAGTTCCATCATGATGCCGCATCCAGCAAGTGCACCTTTCGGCCACAAGCGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAATGAAATTAATTCAATACAGTCAAGTGAAGGGCTCCTGGAAAAAATAATTAAACAAGCAAAGCATATATTTCTGAGGAGTAGAACTGCTGCAACCATTGACAGCTTAGCAAGTCGCATTGAAGATCCTCAGATACAGGCTCATTGGTCAAATATTAATGATGTTTATGAATCTAGTGTGAAAGTCTTAATCACGTCACAAGGCTATGAACAAATATGCAAGTCCATTCAGCTGCAGTTGAATATTGGAGTTGAGCAGATCCGAGTCGTACACAGAGATGGAAGAGTAATTACTCTGTCTCATCAGGAGCAGGAGCTGCAGGATTTCCTTCTGTCTCAGATGTCACAGCATCAGGTGCATGCAGTTCAGCAGCTAGCCAAGGTTATGGGCTGGCAGGTCCTGAGCTTCAGTAATCACGTGGGACTTGGGCCCATAGAGAGCATTGGCAATGCCTCTGCCATAACAGTGGCCTCCCCGAATGGTGACTATGCTATTTCAGTTCGTAATGGCCCTGAAAGTGGCAGCAAGATTATGGTTCAGTTTCCCCGTAACCAGTGTAAAGACCTTCCAAAAAGTGATGTTTTACAAGATAGCAAATGGAATCATCTTCGTGGACCCTTCAAAGAAGTTCAGTGGAATAAAATGGAAGGCCGGAACTTTGTTTACAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGTCTACTATGA

Related Sequences

bmy_22037T0 SequenceType object (3)

Length: 652 aa      View alignments
>bmy_22037T0
MSGVRAVRISIESACEKQVQEVGLDGTETYLQPLSMSQNLARLAQRIDFSQGSGSEEEEAAGADGDTQDWAGAGSSADQDDEEGLVKFQPSLWPWDSVRNNLRGALTEMCVLYDVLSIVRDKKFMTLDPVSQDALPPKQNPQTLQLISKKKSLAGAAQILLKGAERLTKSVTENQENKLQRDFNSELLRLRQHWKLRKVGDKILGDLSYRSAGSLFPHHGTFEVIKNTDIDLDKKIPEDYCPLDVQIPSDLEGSAYIKVSIQKQSPDIGDLGTVNLFKRPLPKSKPGSPHWQTKLEAAQNVLLCKEIFAQLSREAVQIKSQIPHIVVKNQIISQPFPSLQLSISLCHSSNDKKSQKSATEKQSPEDHLYVLEHNLHLLIREFHKQTLSSIMMPHPASAPFGHKRMRLSGPQAFDKNEINSIQSSEGLLEKIIKQAKHIFLRSRTAATIDSLASRIEDPQIQAHWSNINDVYESSVKVLITSQGYEQICKSIQLQLNIGVEQIRVVHRDGRVITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITVASPNGDYAISVRNGPESGSKIMVQFPRNQCKDLPKSDVLQDSKWNHLRGPFKEVQWNKMEGRNFVYKMELLMSALSPCLL*